Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 AC027702.1-201ENST00000563810 1770 ntBASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 AC112907.3-201ENST00000577781 2400 ntBASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 BHLHE23-202ENST00000612929 1109 ntBASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 AC007225.1-201ENST00000566331 1836 ntBASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LCE3DQ9BYE3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 AC121338.2-201ENST00000622535 1744 ntBASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms