Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.86■□□□□ 0.61
RSPO3Q9BXY4 AC243732.1-201ENST00000612648 864 ntBASIC18.86■□□□□ 0.61
RSPO3Q9BXY4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.86■□□□□ 0.61
RSPO3Q9BXY4 AC125437.2-201ENST00000625180 2167 ntBASIC18.86■□□□□ 0.61
RSPO3Q9BXY4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.86■□□□□ 0.61
RSPO3Q9BXY4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 SLC7A5P1-201ENST00000568957 537 ntBASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RSPO3Q9BXY4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 AC120498.10-201ENST00000621827 505 ntBASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.84■□□□□ 0.61
RSPO3Q9BXY4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RSPO3Q9BXY4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RSPO3Q9BXY4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RSPO3Q9BXY4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RSPO3Q9BXY4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RSPO3Q9BXY4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.83■□□□□ 0.6
RSPO3Q9BXY4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.83■□□□□ 0.6
RSPO3Q9BXY4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RSPO3Q9BXY4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO3Q9BXY4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RSPO3Q9BXY4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO3Q9BXY4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO3Q9BXY4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO3Q9BXY4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
RSPO3Q9BXY4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 UBE2DNL-204ENST00000602536 740 ntBASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.82■□□□□ 0.6
RSPO3Q9BXY4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 KRT8P36-201ENST00000489121 1440 ntBASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms