Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 AL391422.3-201ENST00000603791 2761 ntBASIC17.11■□□□□ 0.33
PCGF1Q9BSM1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 AC133552.2-202ENST00000575694 574 ntBASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 AL591742.1-201ENST00000604433 565 ntBASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.1■□□□□ 0.33
PCGF1Q9BSM1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 AC016405.3-201ENST00000607710 860 ntBASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.09■□□□□ 0.33
PCGF1Q9BSM1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCGF1Q9BSM1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCGF1Q9BSM1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
PCGF1Q9BSM1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 AC243732.1-201ENST00000612648 864 ntBASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 AC005229.4-201ENST00000610085 2198 ntBASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.08■□□□□ 0.32
PCGF1Q9BSM1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 MKRN4P-201ENST00000444706 1521 ntBASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 OR10C1-204ENST00000622521 1039 ntBASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 FEM1AP4-201ENST00000443167 1987 ntBASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms