Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPPED1Q9BRF8 AC010141.2-201ENST00000452426 721 ntBASIC19.24■□□□□ 0.67
CPPED1Q9BRF8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.24■□□□□ 0.67
CPPED1Q9BRF8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.24■□□□□ 0.67
CPPED1Q9BRF8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPPED1Q9BRF8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPPED1Q9BRF8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CPPED1Q9BRF8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.24■□□□□ 0.67
CPPED1Q9BRF8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.24■□□□□ 0.67
CPPED1Q9BRF8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPPED1Q9BRF8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.24■□□□□ 0.67
CPPED1Q9BRF8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CPPED1Q9BRF8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 SMG8-203ENST00000578922 2178 ntBASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.22■□□□□ 0.67
CPPED1Q9BRF8 AC116050.2-201ENST00000612102 1779 ntBASIC19.21■□□□□ 0.67
CPPED1Q9BRF8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPPED1Q9BRF8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPPED1Q9BRF8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.21■□□□□ 0.67
CPPED1Q9BRF8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CPPED1Q9BRF8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.21■□□□□ 0.67
CPPED1Q9BRF8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.21■□□□□ 0.67
CPPED1Q9BRF8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
CPPED1Q9BRF8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPPED1Q9BRF8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.21■□□□□ 0.67
CPPED1Q9BRF8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPPED1Q9BRF8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CPPED1Q9BRF8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 IRS3P-201ENST00000223076 1006 ntBASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 AC120498.10-201ENST00000621827 505 ntBASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPPED1Q9BRF8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms