Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.42■□□□□ 0.7
CGREF1Q99674 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGREF1Q99674 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.42■□□□□ 0.7
CGREF1Q99674 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGREF1Q99674 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CGREF1Q99674 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGREF1Q99674 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.42■□□□□ 0.7
CGREF1Q99674 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.42■□□□□ 0.7
CGREF1Q99674 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGREF1Q99674 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CGREF1Q99674 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGREF1Q99674 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CGREF1Q99674 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGREF1Q99674 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CGREF1Q99674 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGREF1Q99674 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.41■□□□□ 0.7
CGREF1Q99674 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.41■□□□□ 0.7
CGREF1Q99674 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
CGREF1Q99674 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.41■□□□□ 0.7
CGREF1Q99674 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGREF1Q99674 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGREF1Q99674 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.41■□□□□ 0.7
CGREF1Q99674 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGREF1Q99674 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.41■□□□□ 0.7
CGREF1Q99674 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGREF1Q99674 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.4■□□□□ 0.7
CGREF1Q99674 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.4■□□□□ 0.7
CGREF1Q99674 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.4■□□□□ 0.7
CGREF1Q99674 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 POU5F1P4-201ENST00000413175 1085 ntBASIC19.4■□□□□ 0.7
CGREF1Q99674 AP001330.3-201ENST00000520123 633 ntBASIC19.4■□□□□ 0.7
CGREF1Q99674 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.4■□□□□ 0.7
CGREF1Q99674 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CGREF1Q99674 AC008175.2-201ENST00000612840 297 ntBASIC19.4■□□□□ 0.7
CGREF1Q99674 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.4■□□□□ 0.7
CGREF1Q99674 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
CGREF1Q99674 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CGREF1Q99674 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CGREF1Q99674 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.39■□□□□ 0.7
CGREF1Q99674 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CGREF1Q99674 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.39■□□□□ 0.7
CGREF1Q99674 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CGREF1Q99674 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CGREF1Q99674 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.39■□□□□ 0.69
CGREF1Q99674 AC012414.1-201ENST00000556676 535 ntBASIC19.39■□□□□ 0.69
CGREF1Q99674 RARRES2P11-201ENST00000635158 484 ntBASIC19.39■□□□□ 0.69
CGREF1Q99674 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.39■□□□□ 0.69
CGREF1Q99674 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CGREF1Q99674 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.39■□□□□ 0.69
CGREF1Q99674 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CGREF1Q99674 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.39■□□□□ 0.69
CGREF1Q99674 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CGREF1Q99674 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CGREF1Q99674 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CGREF1Q99674 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CGREF1Q99674 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CGREF1Q99674 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.38■□□□□ 0.69
CGREF1Q99674 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CGREF1Q99674 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CGREF1Q99674 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CGREF1Q99674 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CGREF1Q99674 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CGREF1Q99674 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CGREF1Q99674 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.38■□□□□ 0.69
CGREF1Q99674 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.38■□□□□ 0.69
CGREF1Q99674 PBX2P1-201ENST00000493219 1291 ntBASIC19.38■□□□□ 0.69
CGREF1Q99674 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CGREF1Q99674 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CGREF1Q99674 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.38■□□□□ 0.69
CGREF1Q99674 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.38■□□□□ 0.69
CGREF1Q99674 TPRG1LP1-201ENST00000598702 760 ntBASIC19.38■□□□□ 0.69
CGREF1Q99674 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CGREF1Q99674 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CGREF1Q99674 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CGREF1Q99674 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CGREF1Q99674 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.37■□□□□ 0.69
CGREF1Q99674 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.37■□□□□ 0.69
CGREF1Q99674 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CGREF1Q99674 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CGREF1Q99674 RASA4CP-201ENST00000424092 1398 ntBASIC19.37■□□□□ 0.69
CGREF1Q99674 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CGREF1Q99674 EDA-201ENST00000338901 1233 ntBASIC19.37■□□□□ 0.69
CGREF1Q99674 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.37■□□□□ 0.69
CGREF1Q99674 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms