Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H4Q96RI1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 AC005332.8-201ENST00000622750 2735 ntBASIC19.25■□□□□ 0.67
NR1H4Q96RI1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H4Q96RI1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 AL033527.3-201ENST00000566366 1196 ntBASIC19.24■□□□□ 0.67
NR1H4Q96RI1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 LTB4R2-202ENST00000528054 3092 ntBASIC19.24■□□□□ 0.67
NR1H4Q96RI1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H4Q96RI1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 AC079598.2-202ENST00000546624 1451 ntBASIC19.23■□□□□ 0.67
NR1H4Q96RI1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NR1H4Q96RI1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 FP700111.2-201ENST00000619190 1892 ntBASIC19.22■□□□□ 0.67
NR1H4Q96RI1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 KRT18P24-201ENST00000344739 1156 ntBASIC19.22■□□□□ 0.67
NR1H4Q96RI1 MIR4281-201ENST00000580852 62 ntBASIC19.22■□□□□ 0.67
NR1H4Q96RI1 AC012354.3-201ENST00000623734 483 ntBASIC19.22■□□□□ 0.67
NR1H4Q96RI1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 AL138781.2-201ENST00000617896 1843 ntBASIC19.22■□□□□ 0.67
NR1H4Q96RI1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms