Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
COL21A1Q96P44 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
COL21A1Q96P44 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL21A1Q96P44 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.29■□□□□ 0.68
COL21A1Q96P44 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL21A1Q96P44 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
COL21A1Q96P44 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
COL21A1Q96P44 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL21A1Q96P44 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.28■□□□□ 0.68
COL21A1Q96P44 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
COL21A1Q96P44 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL21A1Q96P44 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
COL21A1Q96P44 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL21A1Q96P44 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.28■□□□□ 0.68
COL21A1Q96P44 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.28■□□□□ 0.68
COL21A1Q96P44 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL21A1Q96P44 AC006015.1-201ENST00000429970 570 ntBASIC19.28■□□□□ 0.68
COL21A1Q96P44 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL21A1Q96P44 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.28■□□□□ 0.68
COL21A1Q96P44 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL21A1Q96P44 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL21A1Q96P44 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
COL21A1Q96P44 AC073314.1-201ENST00000568729 2216 ntBASIC19.28■□□□□ 0.68
COL21A1Q96P44 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL21A1Q96P44 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL21A1Q96P44 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL21A1Q96P44 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL21A1Q96P44 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
COL21A1Q96P44 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.27■□□□□ 0.68
COL21A1Q96P44 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL21A1Q96P44 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
COL21A1Q96P44 AP005212.1-201ENST00000581547 1997 ntBASIC19.27■□□□□ 0.68
COL21A1Q96P44 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL21A1Q96P44 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL21A1Q96P44 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL21A1Q96P44 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL21A1Q96P44 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.27■□□□□ 0.68
COL21A1Q96P44 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL21A1Q96P44 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
COL21A1Q96P44 SLC7A5P1-201ENST00000568957 537 ntBASIC19.27■□□□□ 0.68
COL21A1Q96P44 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.27■□□□□ 0.68
COL21A1Q96P44 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.27■□□□□ 0.68
COL21A1Q96P44 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.27■□□□□ 0.68
COL21A1Q96P44 MYCNOS-205ENST00000641950 531 ntBASIC19.27■□□□□ 0.68
COL21A1Q96P44 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL21A1Q96P44 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL21A1Q96P44 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL21A1Q96P44 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.67
COL21A1Q96P44 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.27■□□□□ 0.67
COL21A1Q96P44 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
COL21A1Q96P44 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL21A1Q96P44 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL21A1Q96P44 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL21A1Q96P44 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.26■□□□□ 0.67
COL21A1Q96P44 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.26■□□□□ 0.67
COL21A1Q96P44 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.26■□□□□ 0.67
COL21A1Q96P44 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.26■□□□□ 0.67
COL21A1Q96P44 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
COL21A1Q96P44 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.26■□□□□ 0.67
COL21A1Q96P44 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.26■□□□□ 0.67
COL21A1Q96P44 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL21A1Q96P44 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 GABARAPL3-202ENST00000624044 1851 ntBASIC19.26■□□□□ 0.67
COL21A1Q96P44 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL21A1Q96P44 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.25■□□□□ 0.67
COL21A1Q96P44 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.25■□□□□ 0.67
COL21A1Q96P44 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL21A1Q96P44 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL21A1Q96P44 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL21A1Q96P44 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL21A1Q96P44 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL21A1Q96P44 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL21A1Q96P44 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COL21A1Q96P44 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL21A1Q96P44 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COL21A1Q96P44 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.25■□□□□ 0.67
COL21A1Q96P44 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL21A1Q96P44 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.25■□□□□ 0.67
COL21A1Q96P44 IKBKGP1-201ENST00000612193 1073 ntBASIC19.25■□□□□ 0.67
COL21A1Q96P44 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL21A1Q96P44 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL21A1Q96P44 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL21A1Q96P44 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL21A1Q96P44 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
COL21A1Q96P44 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL21A1Q96P44 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL21A1Q96P44 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL21A1Q96P44 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL21A1Q96P44 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms