Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 AP006587.3-201ENST00000525742 1516 ntBASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
CHMP6Q96FZ7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP6Q96FZ7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHMP6Q96FZ7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.55■□□□□ 0.88
CHMP6Q96FZ7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHMP6Q96FZ7 SRD5A1P1-201ENST00000442297 786 ntBASIC20.55■□□□□ 0.88
CHMP6Q96FZ7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.55■□□□□ 0.88
CHMP6Q96FZ7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP6Q96FZ7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHMP6Q96FZ7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHMP6Q96FZ7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 AC099791.2-201ENST00000605725 427 ntBASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHMP6Q96FZ7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHMP6Q96FZ7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHMP6Q96FZ7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP6Q96FZ7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP6Q96FZ7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP6Q96FZ7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP6Q96FZ7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP6Q96FZ7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHMP6Q96FZ7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 AC006455.2-201ENST00000429931 906 ntBASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 pRNA.6-201ENST00000610482 90 ntBASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 pRNA.5-201ENST00000612139 90 ntBASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 pRNA.11-201ENST00000618423 90 ntBASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 pRNA.13-201ENST00000619112 90 ntBASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP6Q96FZ7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP6Q96FZ7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms