Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC11Q96DB2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC11Q96DB2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC11Q96DB2 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.04■□□□□ 0.96
HDAC11Q96DB2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HDAC11Q96DB2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.04■□□□□ 0.96
HDAC11Q96DB2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HDAC11Q96DB2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HDAC11Q96DB2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 FP700111.2-201ENST00000619190 1892 ntBASIC21.03■□□□□ 0.96
HDAC11Q96DB2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.03■□□□□ 0.96
HDAC11Q96DB2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 DUX4L16-201ENST00000555130 1264 ntBASIC21.03■□□□□ 0.96
HDAC11Q96DB2 AL162412.1-201ENST00000567129 965 ntBASIC21.03■□□□□ 0.96
HDAC11Q96DB2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HDAC11Q96DB2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 AL591742.1-201ENST00000604433 565 ntBASIC21.02■□□□□ 0.96
HDAC11Q96DB2 AC011767.1-201ENST00000617410 1153 ntBASIC21.02■□□□□ 0.96
HDAC11Q96DB2 BID-214ENST00000617586 542 ntTSL 5 BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
HDAC11Q96DB2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
HDAC11Q96DB2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.02■□□□□ 0.95
HDAC11Q96DB2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HDAC11Q96DB2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
HDAC11Q96DB2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
HDAC11Q96DB2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 CNN2P6-201ENST00000439038 900 ntBASIC21.01■□□□□ 0.95
HDAC11Q96DB2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 FAM21FP-204ENST00000608637 956 ntBASIC21.01■□□□□ 0.95
HDAC11Q96DB2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 AL157384.1-201ENST00000445995 2473 ntBASIC21.01■□□□□ 0.95
HDAC11Q96DB2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.01■□□□□ 0.95
HDAC11Q96DB2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC11Q96DB2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21■□□□□ 0.95
HDAC11Q96DB2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HDAC11Q96DB2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC11Q96DB2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC11Q96DB2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21■□□□□ 0.95
HDAC11Q96DB2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21■□□□□ 0.95
HDAC11Q96DB2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21■□□□□ 0.95
HDAC11Q96DB2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21■□□□□ 0.95
HDAC11Q96DB2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21■□□□□ 0.95
HDAC11Q96DB2 MIR2861-201ENST00000636310 90 ntBASIC21■□□□□ 0.95
HDAC11Q96DB2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21■□□□□ 0.95
HDAC11Q96DB2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC11Q96DB2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC11Q96DB2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
HDAC11Q96DB2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HDAC11Q96DB2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 AP005212.1-201ENST00000581547 1997 ntBASIC20.99■□□□□ 0.95
HDAC11Q96DB2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms