Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 PGM5P4-201ENST00000421970 445 ntBASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTHRC1Q96CG8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTHRC1Q96CG8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.02■□□□□ 0.63
CTHRC1Q96CG8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CTHRC1Q96CG8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CTHRC1Q96CG8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CTHRC1Q96CG8 AL157384.1-201ENST00000445995 2473 ntBASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 GABARAPL3-202ENST00000624044 1851 ntBASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 AC093787.1-201ENST00000450396 207 ntBASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 AL356652.1-201ENST00000615962 565 ntBASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.01■□□□□ 0.63
CTHRC1Q96CG8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTHRC1Q96CG8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTHRC1Q96CG8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19■□□□□ 0.63
CTHRC1Q96CG8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTHRC1Q96CG8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTHRC1Q96CG8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CTHRC1Q96CG8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTHRC1Q96CG8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CTHRC1Q96CG8 PPP1R14BP3-201ENST00000509033 445 ntBASIC19■□□□□ 0.63
CTHRC1Q96CG8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19■□□□□ 0.63
CTHRC1Q96CG8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19■□□□□ 0.63
CTHRC1Q96CG8 CYP2T3P-201ENST00000601990 817 ntBASIC19■□□□□ 0.63
CTHRC1Q96CG8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTHRC1Q96CG8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTHRC1Q96CG8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19■□□□□ 0.63
CTHRC1Q96CG8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19■□□□□ 0.63
CTHRC1Q96CG8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19■□□□□ 0.63
CTHRC1Q96CG8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CTHRC1Q96CG8 AC020907.5-201ENST00000624372 1936 ntBASIC19■□□□□ 0.63
CTHRC1Q96CG8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTHRC1Q96CG8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19■□□□□ 0.63
CTHRC1Q96CG8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTHRC1Q96CG8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19■□□□□ 0.63
CTHRC1Q96CG8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTHRC1Q96CG8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 AF201337.1-201ENST00000520239 748 ntBASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTHRC1Q96CG8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CTHRC1Q96CG8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms