Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF25Q96BH1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF25Q96BH1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF25Q96BH1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
RNF25Q96BH1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF25Q96BH1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF25Q96BH1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF25Q96BH1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF25Q96BH1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF25Q96BH1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF25Q96BH1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF25Q96BH1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.45■■□□□ 1.02
RNF25Q96BH1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.45■■□□□ 1.02
RNF25Q96BH1 RN7SL832P-201ENST00000607781 1756 ntBASIC21.45■■□□□ 1.02
RNF25Q96BH1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF25Q96BH1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
RNF25Q96BH1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF25Q96BH1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF25Q96BH1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF25Q96BH1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF25Q96BH1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF25Q96BH1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
RNF25Q96BH1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF25Q96BH1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.44■■□□□ 1.02
RNF25Q96BH1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.44■■□□□ 1.02
RNF25Q96BH1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF25Q96BH1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF25Q96BH1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF25Q96BH1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RNF25Q96BH1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF25Q96BH1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF25Q96BH1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF25Q96BH1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF25Q96BH1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF25Q96BH1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF25Q96BH1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RNF25Q96BH1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF25Q96BH1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF25Q96BH1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF25Q96BH1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF25Q96BH1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF25Q96BH1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF25Q96BH1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RNF25Q96BH1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.43■■□□□ 1.02
RNF25Q96BH1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.43■■□□□ 1.02
RNF25Q96BH1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF25Q96BH1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF25Q96BH1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF25Q96BH1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF25Q96BH1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF25Q96BH1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF25Q96BH1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF25Q96BH1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF25Q96BH1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF25Q96BH1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF25Q96BH1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF25Q96BH1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RNF25Q96BH1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF25Q96BH1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF25Q96BH1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF25Q96BH1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF25Q96BH1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF25Q96BH1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF25Q96BH1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF25Q96BH1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF25Q96BH1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF25Q96BH1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF25Q96BH1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF25Q96BH1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF25Q96BH1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF25Q96BH1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.41■■□□□ 1.02
RNF25Q96BH1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.41■■□□□ 1.02
RNF25Q96BH1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RNF25Q96BH1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RNF25Q96BH1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF25Q96BH1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF25Q96BH1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF25Q96BH1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF25Q96BH1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF25Q96BH1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF25Q96BH1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF25Q96BH1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF25Q96BH1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF25Q96BH1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
RNF25Q96BH1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF25Q96BH1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF25Q96BH1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RNF25Q96BH1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF25Q96BH1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF25Q96BH1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF25Q96BH1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF25Q96BH1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF25Q96BH1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF25Q96BH1 RNF165-205ENST00000588679 2904 ntBASIC21.4■■□□□ 1.02
RNF25Q96BH1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF25Q96BH1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF25Q96BH1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF25Q96BH1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF25Q96BH1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RNF25Q96BH1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms