Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 AC011767.1-201ENST00000617410 1153 ntBASIC19.66■□□□□ 0.74
UBE2E3Q969T4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
UBE2E3Q969T4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 AP005212.1-201ENST00000581547 1997 ntBASIC19.65■□□□□ 0.74
UBE2E3Q969T4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 MIR935-201ENST00000401179 91 ntBASIC19.65■□□□□ 0.74
UBE2E3Q969T4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
UBE2E3Q969T4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.64■□□□□ 0.73
UBE2E3Q969T4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 AC022517.1-201ENST00000592429 346 ntBASIC19.64■□□□□ 0.73
UBE2E3Q969T4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 AC231657.2-201ENST00000624556 255 ntBASIC19.64■□□□□ 0.73
UBE2E3Q969T4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBE2E3Q969T4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.63■□□□□ 0.73
UBE2E3Q969T4 DUX4L16-201ENST00000555130 1264 ntBASIC19.63■□□□□ 0.73
UBE2E3Q969T4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms