Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
HPS1Q92902 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.55■□□□□ 0.56
HPS1Q92902 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HPS1Q92902 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HPS1Q92902 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HPS1Q92902 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HPS1Q92902 MIR572-201ENST00000384983 95 ntBASIC18.55■□□□□ 0.56
HPS1Q92902 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.55■□□□□ 0.56
HPS1Q92902 AC027612.3-201ENST00000413684 1047 ntBASIC18.55■□□□□ 0.56
HPS1Q92902 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.55■□□□□ 0.56
HPS1Q92902 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.55■□□□□ 0.56
HPS1Q92902 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS1Q92902 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS1Q92902 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.55■□□□□ 0.56
HPS1Q92902 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.55■□□□□ 0.56
HPS1Q92902 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HPS1Q92902 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.55■□□□□ 0.56
HPS1Q92902 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HPS1Q92902 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS1Q92902 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.54■□□□□ 0.56
HPS1Q92902 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.54■□□□□ 0.56
HPS1Q92902 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
HPS1Q92902 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HPS1Q92902 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HPS1Q92902 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HPS1Q92902 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.54■□□□□ 0.56
HPS1Q92902 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.54■□□□□ 0.56
HPS1Q92902 AC123595.1-201ENST00000440769 1046 ntBASIC18.54■□□□□ 0.56
HPS1Q92902 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.54■□□□□ 0.56
HPS1Q92902 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HPS1Q92902 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.54■□□□□ 0.56
HPS1Q92902 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.54■□□□□ 0.56
HPS1Q92902 AL354811.1-201ENST00000610286 706 ntBASIC18.54■□□□□ 0.56
HPS1Q92902 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.54■□□□□ 0.56
HPS1Q92902 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HPS1Q92902 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.54■□□□□ 0.56
HPS1Q92902 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS1Q92902 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
HPS1Q92902 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HPS1Q92902 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HPS1Q92902 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
HPS1Q92902 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HPS1Q92902 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.53■□□□□ 0.56
HPS1Q92902 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.53■□□□□ 0.56
HPS1Q92902 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.53■□□□□ 0.56
HPS1Q92902 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HPS1Q92902 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HPS1Q92902 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HPS1Q92902 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HPS1Q92902 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.52■□□□□ 0.56
HPS1Q92902 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HPS1Q92902 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HPS1Q92902 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HPS1Q92902 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms