Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.18■□□□□ 0.34
RTN4IP1Q8WWV3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 AC112907.3-201ENST00000577781 2400 ntBASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.17■□□□□ 0.34
RTN4IP1Q8WWV3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 FP700111.2-201ENST00000619190 1892 ntBASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.16■□□□□ 0.34
RTN4IP1Q8WWV3 LINC02228-203ENST00000641970 1355 ntBASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 AL512408.1-201ENST00000569378 2000 ntBASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 YBX1P1-201ENST00000445822 960 ntBASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 AL162377.1-201ENST00000618844 1793 ntBASIC17.15■□□□□ 0.34
RTN4IP1Q8WWV3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.14■□□□□ 0.34
RTN4IP1Q8WWV3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RTN4IP1Q8WWV3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.14■□□□□ 0.33
RTN4IP1Q8WWV3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTN4IP1Q8WWV3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTN4IP1Q8WWV3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms