Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC9Q8TBE3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC9Q8TBE3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FNDC9Q8TBE3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.41■□□□□ 0.54
FNDC9Q8TBE3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 AC073210.2-201ENST00000430369 194 ntBASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 AC092118.2-201ENST00000613495 667 ntBASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 AC100791.3-201ENST00000617619 330 ntBASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FNDC9Q8TBE3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.54
FNDC9Q8TBE3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
FNDC9Q8TBE3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FNDC9Q8TBE3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 CYP2T3P-201ENST00000601990 817 ntBASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FNDC9Q8TBE3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 MCRIP2P1-201ENST00000394346 511 ntBASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 LSM12P1-201ENST00000411836 588 ntBASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 KRT17P1-201ENST00000399211 1546 ntBASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 FEM1AP4-201ENST00000443167 1987 ntBASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC9Q8TBE3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms