Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 AC100791.3-201ENST00000617619 330 ntBASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SRFBP1Q8NEF9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 RARRES2P4-201ENST00000514074 484 ntBASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.5■□□□□ 0.71
SRFBP1Q8NEF9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 MIR2861-201ENST00000636310 90 ntBASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SRFBP1Q8NEF9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 FP700111.2-201ENST00000619190 1892 ntBASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 OR10C1-204ENST00000622521 1039 ntBASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.48■□□□□ 0.71
SRFBP1Q8NEF9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 AC016405.3-201ENST00000607710 860 ntBASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 AC073111.5-205ENST00000641717 521 ntBASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.47■□□□□ 0.71
SRFBP1Q8NEF9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms