Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HIPK4Q8NE63 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK4Q8NE63 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK4Q8NE63 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HIPK4Q8NE63 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.8■□□□□ 0.76
HIPK4Q8NE63 AC018445.3-201ENST00000624177 1945 ntBASIC19.8■□□□□ 0.76
HIPK4Q8NE63 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK4Q8NE63 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK4Q8NE63 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK4Q8NE63 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 AL162377.1-201ENST00000618844 1793 ntBASIC19.79■□□□□ 0.76
HIPK4Q8NE63 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 FP700111.2-201ENST00000619190 1892 ntBASIC19.79■□□□□ 0.76
HIPK4Q8NE63 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK4Q8NE63 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK4Q8NE63 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK4Q8NE63 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK4Q8NE63 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.77■□□□□ 0.76
HIPK4Q8NE63 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK4Q8NE63 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK4Q8NE63 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK4Q8NE63 AC131281.2-201ENST00000520478 145 ntBASIC19.77■□□□□ 0.76
HIPK4Q8NE63 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.77■□□□□ 0.76
HIPK4Q8NE63 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK4Q8NE63 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK4Q8NE63 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK4Q8NE63 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK4Q8NE63 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK4Q8NE63 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.77■□□□□ 0.75
HIPK4Q8NE63 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HIPK4Q8NE63 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
HIPK4Q8NE63 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HIPK4Q8NE63 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HIPK4Q8NE63 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HIPK4Q8NE63 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HIPK4Q8NE63 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 AP006587.3-201ENST00000525742 1516 ntBASIC19.76■□□□□ 0.75
HIPK4Q8NE63 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK4Q8NE63 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms