Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 AL162412.1-201ENST00000567129 965 ntBASIC17.12■□□□□ 0.33
ZNRF1Q8ND25 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ZNRF1Q8ND25 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF1Q8ND25 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNRF1Q8ND25 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF1Q8ND25 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF1Q8ND25 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNRF1Q8ND25 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF1Q8ND25 AC027702.1-201ENST00000563810 1770 ntBASIC17.12■□□□□ 0.33
ZNRF1Q8ND25 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF1Q8ND25 AC007225.1-201ENST00000566331 1836 ntBASIC17.12■□□□□ 0.33
ZNRF1Q8ND25 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNRF1Q8ND25 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 CYP2T1P-201ENST00000432607 1285 ntBASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 AC026185.1-201ENST00000445748 174 ntBASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 AC005181.1-201ENST00000604782 1256 ntBASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 FAM21FP-204ENST00000608637 956 ntBASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNRF1Q8ND25 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 AL157384.1-201ENST00000445995 2473 ntBASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ZNRF1Q8ND25 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 RARRES2P4-201ENST00000514074 484 ntBASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 AC069236.1-201ENST00000604339 616 ntBASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 RAP2CP1-201ENST00000605103 478 ntBASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 AC008694.1-202ENST00000636953 945 ntBASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNRF1Q8ND25 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNRF1Q8ND25 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNRF1Q8ND25 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ZNRF1Q8ND25 AL121603.2-201ENST00000557373 2117 ntBASIC17.08■□□□□ 0.33
ZNRF1Q8ND25 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ZNRF1Q8ND25 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
ZNRF1Q8ND25 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNRF1Q8ND25 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZNRF1Q8ND25 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZNRF1Q8ND25 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZNRF1Q8ND25 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms