Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRPF38AQ8NAV1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.67■■□□□ 1.38
PRPF38AQ8NAV1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRPF38AQ8NAV1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRPF38AQ8NAV1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.67■■□□□ 1.38
PRPF38AQ8NAV1 KRT17P3-201ENST00000420566 1262 ntBASIC23.67■■□□□ 1.38
PRPF38AQ8NAV1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.67■■□□□ 1.38
PRPF38AQ8NAV1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
PRPF38AQ8NAV1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 SOX15-203ENST00000570788 1093 ntBASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 AL356652.1-201ENST00000615962 565 ntBASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.66■■□□□ 1.38
PRPF38AQ8NAV1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF38AQ8NAV1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF38AQ8NAV1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.65■■□□□ 1.38
PRPF38AQ8NAV1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF38AQ8NAV1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.65■■□□□ 1.38
PRPF38AQ8NAV1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.65■■□□□ 1.38
PRPF38AQ8NAV1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF38AQ8NAV1 AC011484.1-201ENST00000377652 1995 ntBASIC23.65■■□□□ 1.38
PRPF38AQ8NAV1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.65■■□□□ 1.38
PRPF38AQ8NAV1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF38AQ8NAV1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRPF38AQ8NAV1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PRPF38AQ8NAV1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
PRPF38AQ8NAV1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PRPF38AQ8NAV1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.64■■□□□ 1.38
PRPF38AQ8NAV1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRPF38AQ8NAV1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.64■■□□□ 1.38
PRPF38AQ8NAV1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PRPF38AQ8NAV1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.64■■□□□ 1.37
PRPF38AQ8NAV1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.64■■□□□ 1.37
PRPF38AQ8NAV1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.64■■□□□ 1.37
PRPF38AQ8NAV1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.64■■□□□ 1.37
PRPF38AQ8NAV1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.64■■□□□ 1.37
PRPF38AQ8NAV1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.64■■□□□ 1.37
PRPF38AQ8NAV1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PRPF38AQ8NAV1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PRPF38AQ8NAV1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 Z98882.1-201ENST00000622160 2253 ntBASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 FBXW4P1-201ENST00000426721 2239 ntBASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 LINC00565-201ENST00000562710 2331 ntBASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 EP400NL-214ENST00000641289 2402 ntBASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PRPF38AQ8NAV1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 AL359736.2-201ENST00000621992 437 ntBASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PRPF38AQ8NAV1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms