Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
HIST3H2BBQ8N257 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 AC138932.1-201ENST00000534164 6830 ntBASIC15.34■□□□□ 0.05
HIST3H2BBQ8N257 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HIST3H2BBQ8N257 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HIST3H2BBQ8N257 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
HIST3H2BBQ8N257 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HIST3H2BBQ8N257 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.33■□□□□ 0.05
HIST3H2BBQ8N257 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HIST3H2BBQ8N257 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.33■□□□□ 0.05
HIST3H2BBQ8N257 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.33■□□□□ 0.05
HIST3H2BBQ8N257 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIST3H2BBQ8N257 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST3H2BBQ8N257 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms