Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
APLFQ8IW19 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
APLFQ8IW19 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
APLFQ8IW19 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.18■□□□□ 0.82
APLFQ8IW19 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
APLFQ8IW19 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
APLFQ8IW19 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
APLFQ8IW19 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
APLFQ8IW19 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
APLFQ8IW19 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
APLFQ8IW19 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APLFQ8IW19 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APLFQ8IW19 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APLFQ8IW19 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
APLFQ8IW19 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.17■□□□□ 0.82
APLFQ8IW19 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.17■□□□□ 0.82
APLFQ8IW19 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APLFQ8IW19 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
APLFQ8IW19 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APLFQ8IW19 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
APLFQ8IW19 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APLFQ8IW19 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.17■□□□□ 0.82
APLFQ8IW19 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
APLFQ8IW19 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
APLFQ8IW19 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
APLFQ8IW19 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.16■□□□□ 0.82
APLFQ8IW19 AL355802.2-201ENST00000402069 882 ntBASIC20.16■□□□□ 0.82
APLFQ8IW19 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.16■□□□□ 0.82
APLFQ8IW19 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.16■□□□□ 0.82
APLFQ8IW19 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
APLFQ8IW19 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.16■□□□□ 0.82
APLFQ8IW19 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.16■□□□□ 0.82
APLFQ8IW19 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.16■□□□□ 0.82
APLFQ8IW19 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APLFQ8IW19 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.16■□□□□ 0.82
APLFQ8IW19 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APLFQ8IW19 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APLFQ8IW19 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.15■□□□□ 0.82
APLFQ8IW19 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
APLFQ8IW19 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
APLFQ8IW19 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
APLFQ8IW19 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APLFQ8IW19 MIR663A-201ENST00000385250 93 ntBASIC20.15■□□□□ 0.82
APLFQ8IW19 GPX1P1-201ENST00000388829 606 ntBASIC20.15■□□□□ 0.82
APLFQ8IW19 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APLFQ8IW19 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.15■□□□□ 0.82
APLFQ8IW19 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APLFQ8IW19 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.15■□□□□ 0.82
APLFQ8IW19 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
APLFQ8IW19 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
APLFQ8IW19 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.14■□□□□ 0.81
APLFQ8IW19 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
APLFQ8IW19 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.14■□□□□ 0.81
APLFQ8IW19 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.14■□□□□ 0.81
APLFQ8IW19 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APLFQ8IW19 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.13■□□□□ 0.81
APLFQ8IW19 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APLFQ8IW19 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APLFQ8IW19 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APLFQ8IW19 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APLFQ8IW19 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APLFQ8IW19 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.13■□□□□ 0.81
APLFQ8IW19 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.13■□□□□ 0.81
APLFQ8IW19 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
APLFQ8IW19 ABHD17AP1-201ENST00000358206 933 ntBASIC20.13■□□□□ 0.81
APLFQ8IW19 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
APLFQ8IW19 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APLFQ8IW19 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
APLFQ8IW19 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APLFQ8IW19 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APLFQ8IW19 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
APLFQ8IW19 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APLFQ8IW19 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
APLFQ8IW19 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms