Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF135Q8IUD6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 FAM99A-202ENST00000538190 1989 ntBASIC21.71■■□□□ 1.07
RNF135Q8IUD6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 SOX15-203ENST00000570788 1093 ntBASIC21.71■■□□□ 1.07
RNF135Q8IUD6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF135Q8IUD6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.07
RNF135Q8IUD6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.7■■□□□ 1.06
RNF135Q8IUD6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 AC097493.4-201ENST00000641197 219 ntBASIC21.7■■□□□ 1.06
RNF135Q8IUD6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF135Q8IUD6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF135Q8IUD6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF135Q8IUD6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF135Q8IUD6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF135Q8IUD6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF135Q8IUD6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF135Q8IUD6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RNF135Q8IUD6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF135Q8IUD6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF135Q8IUD6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF135Q8IUD6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 TSPY15P-201ENST00000457163 923 ntBASIC21.68■■□□□ 1.06
RNF135Q8IUD6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 AC012306.2-201ENST00000609350 630 ntBASIC21.68■■□□□ 1.06
RNF135Q8IUD6 AC100791.3-201ENST00000617619 330 ntBASIC21.68■■□□□ 1.06
RNF135Q8IUD6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF135Q8IUD6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 C11orf96-202ENST00000528572 1834 ntBASIC21.67■■□□□ 1.06
RNF135Q8IUD6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 KRT18P35-201ENST00000510488 1269 ntBASIC21.67■■□□□ 1.06
RNF135Q8IUD6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 AL589743.5-201ENST00000616611 1050 ntBASIC21.67■■□□□ 1.06
RNF135Q8IUD6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF135Q8IUD6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms