Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 AL356652.1-201ENST00000615962 565 ntBASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
RAI1Q7Z5J4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RAI1Q7Z5J4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAI1Q7Z5J4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RAI1Q7Z5J4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RAI1Q7Z5J4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAI1Q7Z5J4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RAI1Q7Z5J4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.54■□□□□ 0.4
RAI1Q7Z5J4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAI1Q7Z5J4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.54■□□□□ 0.4
RAI1Q7Z5J4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAI1Q7Z5J4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RAI1Q7Z5J4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.54■□□□□ 0.4
RAI1Q7Z5J4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.54■□□□□ 0.4
RAI1Q7Z5J4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RAI1Q7Z5J4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 AC026310.3-201ENST00000625186 2373 ntBASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 AF106564.1-201ENST00000607058 2553 ntBASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 MIR718-201ENST00000390190 70 ntBASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.53■□□□□ 0.4
RAI1Q7Z5J4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RAI1Q7Z5J4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms