Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF111Q6ZNA4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RNF111Q6ZNA4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 DUX4L2-201ENST00000561772 1275 ntBASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 DUX4L6-201ENST00000626483 1275 ntBASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 DUX4L1-201ENST00000627662 1275 ntBASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 DUX4L8-201ENST00000629013 1275 ntBASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 DUX4L3-201ENST00000630187 1275 ntBASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 DUX4L7-201ENST00000630678 1275 ntBASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 DUX4L5-201ENST00000630834 1275 ntBASIC19.83■□□□□ 0.77
RNF111Q6ZNA4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF111Q6ZNA4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RNF111Q6ZNA4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF111Q6ZNA4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF111Q6ZNA4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RNF111Q6ZNA4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF111Q6ZNA4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF111Q6ZNA4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF111Q6ZNA4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF111Q6ZNA4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF111Q6ZNA4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 AC099778.1-201ENST00000568593 1911 ntBASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 AC116562.4-201ENST00000641316 2276 ntBASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF111Q6ZNA4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF111Q6ZNA4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms