Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 AC099791.1-201ENST00000416440 715 ntBASIC17.73■□□□□ 0.43
C11orf88Q6PI97 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 MIR6821-201ENST00000617625 74 ntBASIC17.73■□□□□ 0.43
C11orf88Q6PI97 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 AL499627.2-201ENST00000606283 725 ntBASIC17.72■□□□□ 0.43
C11orf88Q6PI97 pRNA.6-201ENST00000610482 90 ntBASIC17.72■□□□□ 0.43
C11orf88Q6PI97 pRNA.5-201ENST00000612139 90 ntBASIC17.72■□□□□ 0.43
C11orf88Q6PI97 pRNA.11-201ENST00000618423 90 ntBASIC17.72■□□□□ 0.43
C11orf88Q6PI97 pRNA.13-201ENST00000619112 90 ntBASIC17.72■□□□□ 0.43
C11orf88Q6PI97 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
C11orf88Q6PI97 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 AC097381.1-201ENST00000429019 1296 ntBASIC17.71■□□□□ 0.43
C11orf88Q6PI97 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 AC120498.9-201ENST00000339021 3867 ntBASIC17.71■□□□□ 0.43
C11orf88Q6PI97 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 AC073314.1-201ENST00000568729 2216 ntBASIC17.71■□□□□ 0.43
C11orf88Q6PI97 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
C11orf88Q6PI97 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.71■□□□□ 0.42
C11orf88Q6PI97 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
C11orf88Q6PI97 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
C11orf88Q6PI97 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 AC079089.2-201ENST00000531211 1277 ntBASIC17.7■□□□□ 0.42
C11orf88Q6PI97 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 PKD1P1-201ENST00000458669 6805 ntBASIC17.7■□□□□ 0.42
C11orf88Q6PI97 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms