Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 RARRES2P11-201ENST00000635158 484 ntBASIC20.82■□□□□ 0.92
CASC4Q6P4E1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CASC4Q6P4E1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 YBX1P1-201ENST00000445822 960 ntBASIC20.81■□□□□ 0.92
CASC4Q6P4E1 AP001160.3-201ENST00000601484 763 ntBASIC20.81■□□□□ 0.92
CASC4Q6P4E1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CASC4Q6P4E1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 SLC7A5P2-201ENST00000553010 536 ntBASIC20.8■□□□□ 0.92
CASC4Q6P4E1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 TERF1P2-201ENST00000583350 1212 ntBASIC20.8■□□□□ 0.92
CASC4Q6P4E1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CASC4Q6P4E1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CASC4Q6P4E1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 CCDC92B-201ENST00000575506 885 ntBASIC20.78■□□□□ 0.92
CASC4Q6P4E1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASC4Q6P4E1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms