Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIF1Q5UIP0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.11■□□□□ 0.81
RIF1Q5UIP0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.11■□□□□ 0.81
RIF1Q5UIP0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIF1Q5UIP0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RIF1Q5UIP0 AC003102.1-202ENST00000563394 1796 ntBASIC20.09■□□□□ 0.81
RIF1Q5UIP0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.09■□□□□ 0.81
RIF1Q5UIP0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RIF1Q5UIP0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.09■□□□□ 0.81
RIF1Q5UIP0 AC116407.4-201ENST00000623319 1061 ntBASIC20.09■□□□□ 0.81
RIF1Q5UIP0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.09■□□□□ 0.81
RIF1Q5UIP0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.09■□□□□ 0.81
RIF1Q5UIP0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RIF1Q5UIP0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RIF1Q5UIP0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RIF1Q5UIP0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.09■□□□□ 0.81
RIF1Q5UIP0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RIF1Q5UIP0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.09■□□□□ 0.81
RIF1Q5UIP0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.09■□□□□ 0.81
RIF1Q5UIP0 AL691432.3-201ENST00000621860 400 ntBASIC20.09■□□□□ 0.81
RIF1Q5UIP0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RIF1Q5UIP0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RIF1Q5UIP0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RIF1Q5UIP0 RNF152P1-201ENST00000397754 604 ntBASIC20.08■□□□□ 0.81
RIF1Q5UIP0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.08■□□□□ 0.81
RIF1Q5UIP0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.08■□□□□ 0.81
RIF1Q5UIP0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.08■□□□□ 0.81
RIF1Q5UIP0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.08■□□□□ 0.81
RIF1Q5UIP0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.08■□□□□ 0.81
RIF1Q5UIP0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.08■□□□□ 0.81
RIF1Q5UIP0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIF1Q5UIP0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RIF1Q5UIP0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RIF1Q5UIP0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIF1Q5UIP0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIF1Q5UIP0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RIF1Q5UIP0 AL121906.2-201ENST00000621597 723 ntBASIC20.07■□□□□ 0.8
RIF1Q5UIP0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 AC137767.1-201ENST00000602918 1920 ntBASIC20.06■□□□□ 0.8
RIF1Q5UIP0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 C11orf96-202ENST00000528572 1834 ntBASIC20.06■□□□□ 0.8
RIF1Q5UIP0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIF1Q5UIP0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.05■□□□□ 0.8
RIF1Q5UIP0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 FAM207BP-201ENST00000447172 505 ntBASIC20.05■□□□□ 0.8
RIF1Q5UIP0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RIF1Q5UIP0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms