Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 AC233702.5-201ENST00000584107 538 ntBASIC31.88■■■□□ 2.69
CCDC18Q5T9S5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC18Q5T9S5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC18Q5T9S5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC18Q5T9S5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
CCDC18Q5T9S5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC18Q5T9S5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC18Q5T9S5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC31.87■■■□□ 2.69
CCDC18Q5T9S5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC18Q5T9S5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC31.87■■■□□ 2.69
CCDC18Q5T9S5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC18Q5T9S5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC31.87■■■□□ 2.69
CCDC18Q5T9S5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
CCDC18Q5T9S5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
CCDC18Q5T9S5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC31.85■■■□□ 2.69
CCDC18Q5T9S5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC31.85■■■□□ 2.69
CCDC18Q5T9S5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC18Q5T9S5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
CCDC18Q5T9S5 AC120498.8-201ENST00000614275 531 ntBASIC31.85■■■□□ 2.69
CCDC18Q5T9S5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC18Q5T9S5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC18Q5T9S5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC18Q5T9S5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC18Q5T9S5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC31.85■■■□□ 2.69
CCDC18Q5T9S5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC31.85■■■□□ 2.69
CCDC18Q5T9S5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC18Q5T9S5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
CCDC18Q5T9S5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
CCDC18Q5T9S5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC18Q5T9S5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC18Q5T9S5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
CCDC18Q5T9S5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC18Q5T9S5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC18Q5T9S5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC31.84■■■□□ 2.69
CCDC18Q5T9S5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC31.84■■■□□ 2.69
CCDC18Q5T9S5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC18Q5T9S5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC18Q5T9S5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC18Q5T9S5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC18Q5T9S5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC18Q5T9S5 AC244015.2-201ENST00000616358 1861 ntBASIC31.83■■■□□ 2.69
CCDC18Q5T9S5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
CCDC18Q5T9S5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC31.83■■■□□ 2.69
CCDC18Q5T9S5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC31.83■■■□□ 2.69
CCDC18Q5T9S5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC31.83■■■□□ 2.69
CCDC18Q5T9S5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC31.83■■■□□ 2.69
CCDC18Q5T9S5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC18Q5T9S5 AC011484.1-201ENST00000377652 1995 ntBASIC31.82■■■□□ 2.69
CCDC18Q5T9S5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC31.82■■■□□ 2.69
CCDC18Q5T9S5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.69
CCDC18Q5T9S5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC18Q5T9S5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC18Q5T9S5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC18Q5T9S5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC18Q5T9S5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.68
CCDC18Q5T9S5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC31.82■■■□□ 2.68
CCDC18Q5T9S5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC31.82■■■□□ 2.68
CCDC18Q5T9S5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC18Q5T9S5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC18Q5T9S5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC31.81■■■□□ 2.68
CCDC18Q5T9S5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC18Q5T9S5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC31.81■■■□□ 2.68
CCDC18Q5T9S5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC18Q5T9S5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC31.81■■■□□ 2.68
CCDC18Q5T9S5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC18Q5T9S5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC18Q5T9S5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC18Q5T9S5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC18Q5T9S5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC31.8■■■□□ 2.68
CCDC18Q5T9S5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC31.8■■■□□ 2.68
CCDC18Q5T9S5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC18Q5T9S5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC31.8■■■□□ 2.68
CCDC18Q5T9S5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CCDC18Q5T9S5 AC006557.6-201ENST00000623071 864 ntBASIC31.8■■■□□ 2.68
CCDC18Q5T9S5 AC073912.3-201ENST00000624414 853 ntBASIC31.8■■■□□ 2.68
CCDC18Q5T9S5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC31.8■■■□□ 2.68
CCDC18Q5T9S5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC18Q5T9S5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC18Q5T9S5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 RPS2P55-201ENST00000397318 883 ntBASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 HES2-206ENST00000489730 730 ntTSL 2 BASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 AC107956.1-201ENST00000494359 873 ntBASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 AL023875.1-201ENST00000640777 796 ntBASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms