Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 AC120498.10-201ENST00000621827 505 ntBASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.3■□□□□ 0.68
LRIF1Q5T3J3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 IRS3P-201ENST00000223076 1006 ntBASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LRIF1Q5T3J3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LRIF1Q5T3J3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LRIF1Q5T3J3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRIF1Q5T3J3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.27■□□□□ 0.68
LRIF1Q5T3J3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.27■□□□□ 0.68
LRIF1Q5T3J3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRIF1Q5T3J3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LRIF1Q5T3J3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.27■□□□□ 0.68
LRIF1Q5T3J3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.27■□□□□ 0.68
LRIF1Q5T3J3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.27■□□□□ 0.68
LRIF1Q5T3J3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.27■□□□□ 0.68
LRIF1Q5T3J3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRIF1Q5T3J3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRIF1Q5T3J3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRIF1Q5T3J3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRIF1Q5T3J3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.27■□□□□ 0.67
LRIF1Q5T3J3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 AC027612.3-201ENST00000413684 1047 ntBASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.26■□□□□ 0.67
LRIF1Q5T3J3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIF1Q5T3J3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms