Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 AL356652.1-201ENST00000615962 565 ntBASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 Z98882.1-201ENST00000622160 2253 ntBASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNFT1Q5M7Z0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 KRT17P3-201ENST00000420566 1262 ntBASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 AL596275.1-201ENST00000423464 877 ntBASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 RPPH1-201ENST00000516869 333 ntBASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 RN7SL471P-201ENST00000580476 299 ntBASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 AC012676.1-201ENST00000574705 1949 ntBASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNFT1Q5M7Z0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 RPS2P4-201ENST00000476944 856 ntBASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 C1QBPP2-201ENST00000528754 825 ntBASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 AC069544.1-201ENST00000609399 999 ntBASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNFT1Q5M7Z0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 AC011484.1-201ENST00000377652 1995 ntBASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 PGM5P4-201ENST00000421970 445 ntBASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNFT1Q5M7Z0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.46■□□□□ 0.54
RNFT1Q5M7Z0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 POM121L13P-201ENST00000422362 380 ntBASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms