Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 AF213884.3-201ENST00000563833 479 ntBASIC19.64■□□□□ 0.73
PDCD4Q53EL6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDCD4Q53EL6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 AL354811.1-201ENST00000610286 706 ntBASIC19.63■□□□□ 0.73
PDCD4Q53EL6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDCD4Q53EL6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDCD4Q53EL6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDCD4Q53EL6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDCD4Q53EL6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDCD4Q53EL6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PDCD4Q53EL6 AC008406.3-201ENST00000620001 1374 ntBASIC19.62■□□□□ 0.73
PDCD4Q53EL6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.62■□□□□ 0.73
PDCD4Q53EL6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDCD4Q53EL6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDCD4Q53EL6 TCF3P1-201ENST00000423021 1937 ntBASIC19.62■□□□□ 0.73
PDCD4Q53EL6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDCD4Q53EL6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PDCD4Q53EL6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDCD4Q53EL6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDCD4Q53EL6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 KRT87P-202ENST00000534226 1464 ntBASIC19.61■□□□□ 0.73
PDCD4Q53EL6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 AC245052.3-201ENST00000450182 901 ntBASIC19.61■□□□□ 0.73
PDCD4Q53EL6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PDCD4Q53EL6 KRT16P2-201ENST00000414673 1423 ntBASIC19.6■□□□□ 0.73
PDCD4Q53EL6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.6■□□□□ 0.73
PDCD4Q53EL6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 AL136967.2-201ENST00000623968 743 ntBASIC19.6■□□□□ 0.73
PDCD4Q53EL6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDCD4Q53EL6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 AC079140.4-201ENST00000507448 529 ntBASIC19.59■□□□□ 0.73
PDCD4Q53EL6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 AC138907.5-202ENST00000569484 235 ntBASIC19.59■□□□□ 0.73
PDCD4Q53EL6 AL031432.3-201ENST00000607698 485 ntBASIC19.59■□□□□ 0.73
PDCD4Q53EL6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms