Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PTPN20Q4JDL3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
PTPN20Q4JDL3 PKD1P6-201ENST00000343738 4769 ntBASIC21.58■■□□□ 1.04
PTPN20Q4JDL3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.58■■□□□ 1.04
PTPN20Q4JDL3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PTPN20Q4JDL3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PTPN20Q4JDL3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.58■■□□□ 1.04
PTPN20Q4JDL3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.58■■□□□ 1.04
PTPN20Q4JDL3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 AC092666.2-201ENST00000613287 246 ntBASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 CYP21A1P-202ENST00000354927 1481 ntBASIC21.57■■□□□ 1.04
PTPN20Q4JDL3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 AC005181.1-201ENST00000604782 1256 ntBASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.56■■□□□ 1.04
PTPN20Q4JDL3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 AL050303.2-201ENST00000619798 666 ntBASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
PTPN20Q4JDL3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 GABARAPL3-202ENST00000624044 1851 ntBASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 AC026185.1-201ENST00000445748 174 ntBASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 KRT8P36-201ENST00000489121 1440 ntBASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPN20Q4JDL3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 AC020907.5-201ENST00000624372 1936 ntBASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 CROCCP5-201ENST00000436658 830 ntBASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 AC069236.1-201ENST00000604339 616 ntBASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 AC087633.2-202ENST00000565166 1439 ntBASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN20Q4JDL3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.52■■□□□ 1.04
PTPN20Q4JDL3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms