Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 YHL006W-AYHL006W-A 354 nt3.25□□□□□ -1.89
SSL1Q04673 ISF1YMR081C 1017 nt3.25□□□□□ -1.89
SSL1Q04673 YPL229WYPL229W 621 nt3.25□□□□□ -1.89
SSL1Q04673 AUS1YOR011W 4185 nt3.25□□□□□ -1.89
SSL1Q04673 CDH1YGL003C 1701 nt3.24□□□□□ -1.89
SSL1Q04673 MYO5YMR109W 3660 nt3.24□□□□□ -1.89
SSL1Q04673 NPR1YNL183C 2373 nt3.24□□□□□ -1.89
SSL1Q04673 YDR034C-DYDR034C-D 5313 nt3.24□□□□□ -1.89
SSL1Q04673 FLO5YHR211W 3228 nt3.24□□□□□ -1.89
SSL1Q04673 LEU3YLR451W 2661 nt3.24□□□□□ -1.89
SSL1Q04673 PKH1YDR490C 2301 nt3.24□□□□□ -1.89
SSL1Q04673 FAP7YDL166C 594 nt3.24□□□□□ -1.89
SSL1Q04673 YDR169C-AYDR169C-A 150 nt3.24□□□□□ -1.89
SSL1Q04673 HPA3YEL066W 540 nt3.24□□□□□ -1.89
SSL1Q04673 YER039C-AYER039C-A 219 nt3.24□□□□□ -1.89
SSL1Q04673 YFL063WYFL063W 456 nt3.24□□□□□ -1.89
SSL1Q04673 RPS22BYLR367W 393 nt3.24□□□□□ -1.89
SSL1Q04673 VPS3YDR495C 3036 nt3.24□□□□□ -1.89
SSL1Q04673 IOC3YFR013W 2364 nt3.23□□□□□ -1.89
SSL1Q04673 STU2YLR045C 2667 nt3.23□□□□□ -1.89
SSL1Q04673 GOT1YMR292W 417 nt3.23□□□□□ -1.89
SSL1Q04673 EGD1YPL037C 474 nt3.23□□□□□ -1.89
SSL1Q04673 SPP382YLR424W 2127 nt3.23□□□□□ -1.89
SSL1Q04673 REC8YPR007C 2043 nt3.22□□□□□ -1.89
SSL1Q04673 ENA2YDR039C 3276 nt3.22□□□□□ -1.89
SSL1Q04673 ENA1YDR040C 3276 nt3.22□□□□□ -1.89
SSL1Q04673 tK(UUU)DtK(UUU)D 73 nt3.22□□□□□ -1.89
SSL1Q04673 tK(UUU)G1tK(UUU)G1 73 nt3.22□□□□□ -1.89
SSL1Q04673 tK(UUU)G2tK(UUU)G2 73 nt3.22□□□□□ -1.89
SSL1Q04673 tK(UUU)KtK(UUU)K 73 nt3.22□□□□□ -1.89
SSL1Q04673 tK(UUU)LtK(UUU)L 73 nt3.22□□□□□ -1.89
SSL1Q04673 tK(UUU)OtK(UUU)O 73 nt3.22□□□□□ -1.89
SSL1Q04673 tK(UUU)PtK(UUU)P 73 nt3.22□□□□□ -1.89
SSL1Q04673 RPL30YGL030W 318 nt3.22□□□□□ -1.89
SSL1Q04673 YIL058WYIL058W 285 nt3.22□□□□□ -1.89
SSL1Q04673 YJL015CYJL015C 285 nt3.22□□□□□ -1.89
SSL1Q04673 ESF2YNR054C 951 nt3.22□□□□□ -1.89
SSL1Q04673 YPL152W-AYPL152W-A 99 nt3.22□□□□□ -1.89
SSL1Q04673 YJL016WYJL016W 1686 nt3.22□□□□□ -1.89
SSL1Q04673 BCH1YMR237W 2175 nt3.22□□□□□ -1.89
SSL1Q04673 TPS2YDR074W 2691 nt3.22□□□□□ -1.89
SSL1Q04673 PCF11YDR228C 1881 nt3.22□□□□□ -1.89
SSL1Q04673 SIZ1YDR409W 2715 nt3.21□□□□□ -1.89
SSL1Q04673 GIS4YML006C 2325 nt3.21□□□□□ -1.89
SSL1Q04673 YGR265WYGR265W 411 nt3.21□□□□□ -1.9
SSL1Q04673 YPR014CYPR014C 330 nt3.21□□□□□ -1.9
SSL1Q04673 SWD3YBR175W 948 nt3.21□□□□□ -1.9
SSL1Q04673 NOP4YPL043W 2058 nt3.21□□□□□ -1.9
SSL1Q04673 TCP1YDR212W 1680 nt3.2□□□□□ -1.9
SSL1Q04673 MAK21YDR060W 3078 nt3.2□□□□□ -1.9
SSL1Q04673 MSS11YMR164C 2277 nt3.2□□□□□ -1.9
SSL1Q04673 ADK1YDR226W 669 nt3.2□□□□□ -1.9
SSL1Q04673 YLR154C-HYLR154C-H 132 nt3.2□□□□□ -1.9
SSL1Q04673 YLR156C-AYLR156C-A 132 nt3.2□□□□□ -1.9
SSL1Q04673 YLR157C-CYLR157C-C 132 nt3.2□□□□□ -1.9
SSL1Q04673 YLR159C-AYLR159C-A 132 nt3.2□□□□□ -1.9
SSL1Q04673 YOP1YPR028W 543 nt3.2□□□□□ -1.9
SSL1Q04673 YNL034WYNL034W 1839 nt3.2□□□□□ -1.9
SSL1Q04673 ECM5YMR176W 4236 nt3.2□□□□□ -1.9
SSL1Q04673 SMC3YJL074C 3693 nt3.2□□□□□ -1.9
SSL1Q04673 VPS41YDR080W 2979 nt3.19□□□□□ -1.9
SSL1Q04673 MDV1YJL112W 2145 nt3.19□□□□□ -1.9
SSL1Q04673 YLR352WYLR352W 2424 nt3.19□□□□□ -1.9
SSL1Q04673 UTP30YKR060W 825 nt3.19□□□□□ -1.9
SSL1Q04673 APC9YLR102C 798 nt3.19□□□□□ -1.9
SSL1Q04673 COX7YMR256C 183 nt3.19□□□□□ -1.9
SSL1Q04673 YBR085C-AYBR085C-A 258 nt3.19□□□□□ -1.9
SSL1Q04673 snR51snR51 107 nt3.19□□□□□ -1.9
SSL1Q04673 NAN1YPL126W 2691 nt3.19□□□□□ -1.9
SSL1Q04673 YAT2YER024W 2772 nt3.18□□□□□ -1.9
SSL1Q04673 XRN1YGL173C 4587 nt3.18□□□□□ -1.9
SSL1Q04673 YHR078WYHR078W 1659 nt3.18□□□□□ -1.9
SSL1Q04673 YDL011CYDL011C 324 nt3.18□□□□□ -1.9
SSL1Q04673 RPS17BYDR447C 411 nt3.18□□□□□ -1.9
SSL1Q04673 HYR1YIR037W 492 nt3.18□□□□□ -1.9
SSL1Q04673 YPK1YKL126W 2043 nt3.18□□□□□ -1.9
SSL1Q04673 ENA5YDR038C 3276 nt3.18□□□□□ -1.9
SSL1Q04673 EXO84YBR102C 2262 nt3.17□□□□□ -1.9
SSL1Q04673 YHR080CYHR080C 4038 nt3.17□□□□□ -1.9
SSL1Q04673 YER023C-AYER023C-A 213 nt3.17□□□□□ -1.9
SSL1Q04673 YFL065CYFL065C 309 nt3.17□□□□□ -1.9
SSL1Q04673 TMA22YJR014W 597 nt3.17□□□□□ -1.9
SSL1Q04673 BLI1YKL061W 342 nt3.17□□□□□ -1.9
SSL1Q04673 PSY1YKL076C 384 nt3.17□□□□□ -1.9
SSL1Q04673 COA4YLR218C 453 nt3.17□□□□□ -1.9
SSL1Q04673 GIS2YNL255C 462 nt3.17□□□□□ -1.9
SSL1Q04673 GCN1YGL195W 8019 nt3.17□□□□□ -1.9
SSL1Q04673 RKM1YPL208W 1752 nt3.17□□□□□ -1.9
SSL1Q04673 TAF2YCR042C 4224 nt3.17□□□□□ -1.9
SSL1Q04673 CIN8YEL061C 3003 nt3.17□□□□□ -1.9
SSL1Q04673 COG3YER157W 2406 nt3.17□□□□□ -1.9
SSL1Q04673 STE6YKL209C 3873 nt3.16□□□□□ -1.9
SSL1Q04673 POM152YMR129W 4014 nt3.16□□□□□ -1.9
SSL1Q04673 YDR210W-BYDR210W-B 5313 nt3.16□□□□□ -1.9
SSL1Q04673 YDR261W-BYDR261W-B 5313 nt3.16□□□□□ -1.9
SSL1Q04673 YFL002W-AYFL002W-A 5313 nt3.16□□□□□ -1.9
SSL1Q04673 YGR161W-BYGR161W-B 5313 nt3.16□□□□□ -1.9
SSL1Q04673 YLR410W-BYLR410W-B 5313 nt3.16□□□□□ -1.9
SSL1Q04673 YCL019WYCL019W 5313 nt3.16□□□□□ -1.9
SSL1Q04673 RPL26AYLR344W 384 nt3.16□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms