Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 YLR156C-AYLR156C-A 132 nt3.68□□□□□ -1.82
UBP3Q01477 YLR157C-CYLR157C-C 132 nt3.68□□□□□ -1.82
UBP3Q01477 YLR159C-AYLR159C-A 132 nt3.68□□□□□ -1.82
UBP3Q01477 PEX1YKL197C 3132 nt3.67□□□□□ -1.82 RIP-Chip
UBP3Q01477 BOI1YBL085W 2943 nt3.67□□□□□ -1.82 RIP-Chip
UBP3Q01477 IRC23YOR044W 474 nt3.67□□□□□ -1.82
UBP3Q01477 BMS1YPL217C 3552 nt3.67□□□□□ -1.82
UBP3Q01477 KIN82YCR091W 2163 nt3.66□□□□□ -1.82
UBP3Q01477 TRZ1YKR079C 2517 nt3.66□□□□□ -1.82
UBP3Q01477 YER039C-AYER039C-A 219 nt3.66□□□□□ -1.82
UBP3Q01477 YER188C-AYER188C-A 300 nt3.66□□□□□ -1.82
UBP3Q01477 YLR458WYLR458W 381 nt3.66□□□□□ -1.82
UBP3Q01477 VAS1YGR094W 3315 nt3.66□□□□□ -1.82
UBP3Q01477 DPB11YJL090C 2295 nt3.65□□□□□ -1.82
UBP3Q01477 FMP32YFL046W 624 nt3.65□□□□□ -1.83
UBP3Q01477 RAD6YGL058W 519 nt3.65□□□□□ -1.83
UBP3Q01477 PFD1YJL179W 330 nt3.65□□□□□ -1.83 RIP-Chip
UBP3Q01477 SMC3YJL074C 3693 nt3.65□□□□□ -1.83
UBP3Q01477 YSW1YBR148W 1830 nt3.65□□□□□ -1.83
UBP3Q01477 SEA4YBL104C 3117 nt3.64□□□□□ -1.83
UBP3Q01477 SQS1YNL224C 2304 nt3.64□□□□□ -1.83 RIP-Chip
UBP3Q01477 RPL30YGL030W 318 nt3.64□□□□□ -1.83
UBP3Q01477 URM1YIL008W 300 nt3.64□□□□□ -1.83
UBP3Q01477 APQ12YIL040W 417 nt3.64□□□□□ -1.83
UBP3Q01477 YJL182CYJL182C 318 nt3.64□□□□□ -1.83
UBP3Q01477 PAU23YLR037C 375 nt3.64□□□□□ -1.83 RIP-Chip
UBP3Q01477 YBR085C-AYBR085C-A 258 nt3.64□□□□□ -1.83
UBP3Q01477 CDH1YGL003C 1701 nt3.64□□□□□ -1.83 RIP-Chip
UBP3Q01477 YOL057WYOL057W 2136 nt3.64□□□□□ -1.83 RIP-Chip
UBP3Q01477 WIP1YDR374W-A 270 nt3.63□□□□□ -1.83
UBP3Q01477 YMR31YFR049W 372 nt3.63□□□□□ -1.83
UBP3Q01477 YJR140W-AYJR140W-A 150 nt3.63□□□□□ -1.83
UBP3Q01477 YPR108W-AYPR108W-A 213 nt3.63□□□□□ -1.83
UBP3Q01477 RPA135YPR010C 3612 nt3.63□□□□□ -1.83 RIP-Chip
UBP3Q01477 PAC1YOR269W 1485 nt3.62□□□□□ -1.83
UBP3Q01477 YLL032CYLL032C 2478 nt3.62□□□□□ -1.83
UBP3Q01477 DAN4YJR151C 3486 nt3.62□□□□□ -1.83 RIP-Chip
UBP3Q01477 YJR023CYJR023C 402 nt3.62□□□□□ -1.83
UBP3Q01477 RPL37AYLR185W 267 nt3.62□□□□□ -1.83
UBP3Q01477 SHH3YMR118C 591 nt3.62□□□□□ -1.83
UBP3Q01477 ISU1YPL135W 498 nt3.62□□□□□ -1.83
UBP3Q01477 YCL023CYCL023C 348 nt3.62□□□□□ -1.83
UBP3Q01477 TLC1TLC1 1301 nt3.62□□□□□ -1.83
UBP3Q01477 SNX41YDR425W 1878 nt3.62□□□□□ -1.83
UBP3Q01477 NUP60YAR002W 1620 nt3.62□□□□□ -1.83
UBP3Q01477 URA2YJL130C 6645 nt3.62□□□□□ -1.83
UBP3Q01477 RKM1YPL208W 1752 nt3.61□□□□□ -1.83 RIP-Chip
UBP3Q01477 MET10YFR030W 3108 nt3.61□□□□□ -1.83
UBP3Q01477 IKI3YLR384C 4050 nt3.61□□□□□ -1.83
UBP3Q01477 ISD11YER048W-A 285 nt3.61□□□□□ -1.83
UBP3Q01477 Q0143Q0143 153 nt3.61□□□□□ -1.83
UBP3Q01477 YHL006W-AYHL006W-A 354 nt3.61□□□□□ -1.83
UBP3Q01477 YPR014CYPR014C 330 nt3.61□□□□□ -1.83
UBP3Q01477 DSE4YNR067C 3354 nt3.61□□□□□ -1.83
UBP3Q01477 DUF1YOL087C 3351 nt3.61□□□□□ -1.83
UBP3Q01477 STE23YLR389C 3084 nt3.61□□□□□ -1.83
UBP3Q01477 YAK1YJL141C 2424 nt3.61□□□□□ -1.83
UBP3Q01477 PDC2YDR081C 2778 nt3.61□□□□□ -1.83
UBP3Q01477 YAT2YER024W 2772 nt3.61□□□□□ -1.83
UBP3Q01477 SIP3YNL257C 3690 nt3.6□□□□□ -1.83
UBP3Q01477 SPA2YLL021W 4401 nt3.6□□□□□ -1.83
UBP3Q01477 MSR1YHR091C 1932 nt3.6□□□□□ -1.83 RIP-Chip
UBP3Q01477 FAR1YJL157C 2493 nt3.6□□□□□ -1.83
UBP3Q01477 TIF35YDR429C 825 nt3.6□□□□□ -1.83
UBP3Q01477 IRC4YDR540C 540 nt3.6□□□□□ -1.83
UBP3Q01477 tV(CAC)DtV(CAC)D 73 nt3.6□□□□□ -1.83
UBP3Q01477 tV(CAC)HtV(CAC)H 73 nt3.6□□□□□ -1.83
UBP3Q01477 PSY1YKL076C 384 nt3.6□□□□□ -1.83
UBP3Q01477 YKL111CYKL111C 336 nt3.6□□□□□ -1.83
UBP3Q01477 DNM1YLL001W 2274 nt3.6□□□□□ -1.83
UBP3Q01477 BCH1YMR237W 2175 nt3.59□□□□□ -1.83
UBP3Q01477 YIL066W-AYIL066W-A 444 nt3.59□□□□□ -1.83
UBP3Q01477 PAM16YJL104W 450 nt3.59□□□□□ -1.83
UBP3Q01477 TAR1YLR154W-C 375 nt3.59□□□□□ -1.83
UBP3Q01477 RPS22BYLR367W 393 nt3.59□□□□□ -1.83
UBP3Q01477 YLR001CYLR001C 2589 nt3.59□□□□□ -1.83
UBP3Q01477 FUS1YCL027W 1539 nt3.59□□□□□ -1.84
UBP3Q01477 YHR078WYHR078W 1659 nt3.59□□□□□ -1.84
UBP3Q01477 SNF12YNR023W 1701 nt3.58□□□□□ -1.84
UBP3Q01477 GLC3YEL011W 2115 nt3.58□□□□□ -1.84
UBP3Q01477 YDR344CYDR344C 444 nt3.58□□□□□ -1.84
UBP3Q01477 ANB1YJR047C 474 nt3.58□□□□□ -1.84
UBP3Q01477 YLR466C-BYLR466C-B 117 nt3.58□□□□□ -1.84
UBP3Q01477 EGD1YPL037C 474 nt3.58□□□□□ -1.84
UBP3Q01477 ARP7YPR034W 1434 nt3.58□□□□□ -1.84
UBP3Q01477 MDN1YLR106C 14733 nt3.58□□□□□ -1.84
UBP3Q01477 MCD1YDL003W 1701 nt3.57□□□□□ -1.84
UBP3Q01477 PKH1YDR490C 2301 nt3.57□□□□□ -1.84 RIP-Chip
UBP3Q01477 COG3YER157W 2406 nt3.57□□□□□ -1.84
UBP3Q01477 ALG13YGL047W 609 nt3.57□□□□□ -1.84
UBP3Q01477 PFK26YIL107C 2484 nt3.57□□□□□ -1.84
UBP3Q01477 TMA10YLR327C 261 nt3.57□□□□□ -1.84
UBP3Q01477 GOT1YMR292W 417 nt3.57□□□□□ -1.84 RIP-Chip
UBP3Q01477 YMR307C-AYMR307C-A 195 nt3.57□□□□□ -1.84
UBP3Q01477 NPR1YNL183C 2373 nt3.57□□□□□ -1.84 RIP-Chip
UBP3Q01477 APC2YLR127C 2562 nt3.57□□□□□ -1.84
UBP3Q01477 OSW7YFR039C 1533 nt3.56□□□□□ -1.84
UBP3Q01477 TSA2YDR453C 591 nt3.56□□□□□ -1.84
UBP3Q01477 HPA3YEL066W 540 nt3.56□□□□□ -1.84
UBP3Q01477 YGL149WYGL149W 306 nt3.56□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 140.5 ms