Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.7■□□□□ 0.9
WNT3AP56704 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
WNT3AP56704 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.7■□□□□ 0.9
WNT3AP56704 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
WNT3AP56704 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
WNT3AP56704 AP005212.1-201ENST00000581547 1997 ntBASIC20.7■□□□□ 0.9
WNT3AP56704 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.7■□□□□ 0.9
WNT3AP56704 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
WNT3AP56704 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
WNT3AP56704 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
WNT3AP56704 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
WNT3AP56704 AC007322.1-201ENST00000426983 750 ntBASIC20.69■□□□□ 0.9
WNT3AP56704 AL137784.2-201ENST00000607332 1000 ntBASIC20.69■□□□□ 0.9
WNT3AP56704 AC080038.1-201ENST00000611274 1154 ntBASIC20.69■□□□□ 0.9
WNT3AP56704 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.69■□□□□ 0.9
WNT3AP56704 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.69■□□□□ 0.9
WNT3AP56704 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
WNT3AP56704 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 AC092667.1-201ENST00000434301 2586 ntBASIC20.69■□□□□ 0.9
WNT3AP56704 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
WNT3AP56704 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.69■□□□□ 0.9
WNT3AP56704 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
WNT3AP56704 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.68■□□□□ 0.9
WNT3AP56704 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
WNT3AP56704 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
WNT3AP56704 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
WNT3AP56704 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
WNT3AP56704 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.68■□□□□ 0.9
WNT3AP56704 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.68■□□□□ 0.9
WNT3AP56704 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.68■□□□□ 0.9
WNT3AP56704 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.68■□□□□ 0.9
WNT3AP56704 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.68■□□□□ 0.9
WNT3AP56704 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.68■□□□□ 0.9
WNT3AP56704 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.68■□□□□ 0.9
WNT3AP56704 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.68■□□□□ 0.9
WNT3AP56704 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
WNT3AP56704 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
WNT3AP56704 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
WNT3AP56704 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
WNT3AP56704 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
WNT3AP56704 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
WNT3AP56704 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
WNT3AP56704 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
WNT3AP56704 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
WNT3AP56704 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.67■□□□□ 0.9
WNT3AP56704 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
WNT3AP56704 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
WNT3AP56704 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.67■□□□□ 0.9
WNT3AP56704 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
WNT3AP56704 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
WNT3AP56704 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
WNT3AP56704 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
WNT3AP56704 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.67■□□□□ 0.9
WNT3AP56704 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
WNT3AP56704 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
WNT3AP56704 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
WNT3AP56704 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
WNT3AP56704 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
WNT3AP56704 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.67■□□□□ 0.9
WNT3AP56704 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
WNT3AP56704 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
WNT3AP56704 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.66■□□□□ 0.9
WNT3AP56704 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
WNT3AP56704 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.66■□□□□ 0.9
WNT3AP56704 RARRES2P4-201ENST00000514074 484 ntBASIC20.66■□□□□ 0.9
WNT3AP56704 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.66■□□□□ 0.9
WNT3AP56704 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.66■□□□□ 0.9
WNT3AP56704 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.66■□□□□ 0.9
WNT3AP56704 AC073111.5-205ENST00000641717 521 ntBASIC20.66■□□□□ 0.9
WNT3AP56704 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.66■□□□□ 0.9
WNT3AP56704 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.66■□□□□ 0.9
WNT3AP56704 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
WNT3AP56704 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.66■□□□□ 0.9
WNT3AP56704 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
WNT3AP56704 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
WNT3AP56704 GABARAPL3-202ENST00000624044 1851 ntBASIC20.66■□□□□ 0.9
WNT3AP56704 LINC01521-201ENST00000504184 1943 ntBASIC20.66■□□□□ 0.9
WNT3AP56704 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.66■□□□□ 0.9
WNT3AP56704 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
WNT3AP56704 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.66■□□□□ 0.9
WNT3AP56704 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.66■□□□□ 0.9
WNT3AP56704 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
WNT3AP56704 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
WNT3AP56704 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
WNT3AP56704 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
WNT3AP56704 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
WNT3AP56704 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
WNT3AP56704 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
WNT3AP56704 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms