Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH12P55289 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH12P55289 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH12P55289 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH12P55289 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH12P55289 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDH12P55289 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH12P55289 AC061975.6-201ENST00000579045 1553 ntBASIC19.03■□□□□ 0.64
CDH12P55289 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH12P55289 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CDH12P55289 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH12P55289 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH12P55289 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH12P55289 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH12P55289 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH12P55289 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CDH12P55289 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH12P55289 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH12P55289 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH12P55289 AC011484.1-201ENST00000377652 1995 ntBASIC19.02■□□□□ 0.64
CDH12P55289 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH12P55289 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH12P55289 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH12P55289 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH12P55289 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH12P55289 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH12P55289 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH12P55289 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH12P55289 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH12P55289 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH12P55289 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH12P55289 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH12P55289 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH12P55289 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.02■□□□□ 0.63
CDH12P55289 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH12P55289 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CDH12P55289 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH12P55289 AC099778.1-201ENST00000568593 1911 ntBASIC19.02■□□□□ 0.63
CDH12P55289 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH12P55289 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CDH12P55289 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CDH12P55289 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH12P55289 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH12P55289 MIR638-201ENST00000385237 100 ntBASIC19.01■□□□□ 0.63
CDH12P55289 AC079140.4-201ENST00000507448 529 ntBASIC19.01■□□□□ 0.63
CDH12P55289 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.01■□□□□ 0.63
CDH12P55289 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH12P55289 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH12P55289 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH12P55289 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH12P55289 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CDH12P55289 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH12P55289 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH12P55289 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH12P55289 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19■□□□□ 0.63
CDH12P55289 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH12P55289 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
CDH12P55289 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH12P55289 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH12P55289 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDH12P55289 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CDH12P55289 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH12P55289 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19■□□□□ 0.63
CDH12P55289 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH12P55289 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH12P55289 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH12P55289 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH12P55289 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDH12P55289 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH12P55289 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH12P55289 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH12P55289 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CDH12P55289 AP004607.4-201ENST00000530158 1459 ntBASIC18.99■□□□□ 0.63
CDH12P55289 KRT87P-202ENST00000534226 1464 ntBASIC18.99■□□□□ 0.63
CDH12P55289 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH12P55289 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH12P55289 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH12P55289 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH12P55289 AC027612.3-201ENST00000413684 1047 ntBASIC18.99■□□□□ 0.63
CDH12P55289 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH12P55289 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH12P55289 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH12P55289 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH12P55289 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH12P55289 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH12P55289 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH12P55289 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDH12P55289 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH12P55289 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH12P55289 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH12P55289 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDH12P55289 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH12P55289 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH12P55289 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.98■□□□□ 0.63
CDH12P55289 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CDH12P55289 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH12P55289 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.98■□□□□ 0.63
CDH12P55289 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDH12P55289 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDH12P55289 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms