Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH11P55287 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDH11P55287 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH11P55287 AC007952.6-201ENST00000573168 2673 ntBASIC18.69■□□□□ 0.58
CDH11P55287 AC003957.1-201ENST00000625108 2673 ntBASIC18.69■□□□□ 0.58
CDH11P55287 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH11P55287 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH11P55287 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDH11P55287 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH11P55287 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH11P55287 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH11P55287 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDH11P55287 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH11P55287 AC090192.1-201ENST00000517740 490 ntBASIC18.69■□□□□ 0.58
CDH11P55287 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH11P55287 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH11P55287 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH11P55287 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH11P55287 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDH11P55287 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH11P55287 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH11P55287 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH11P55287 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH11P55287 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDH11P55287 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH11P55287 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
CDH11P55287 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CDH11P55287 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH11P55287 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH11P55287 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH11P55287 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH11P55287 AFG3L1P-217ENST00000557444 2447 ntBASIC18.68■□□□□ 0.58
CDH11P55287 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH11P55287 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH11P55287 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH11P55287 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH11P55287 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH11P55287 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH11P55287 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CDH11P55287 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH11P55287 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH11P55287 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
CDH11P55287 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDH11P55287 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
CDH11P55287 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDH11P55287 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH11P55287 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.67■□□□□ 0.58
CDH11P55287 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH11P55287 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH11P55287 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDH11P55287 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH11P55287 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDH11P55287 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH11P55287 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH11P55287 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDH11P55287 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDH11P55287 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH11P55287 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH11P55287 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CDH11P55287 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH11P55287 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH11P55287 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.66■□□□□ 0.58
CDH11P55287 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH11P55287 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH11P55287 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH11P55287 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH11P55287 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH11P55287 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDH11P55287 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.66■□□□□ 0.58
CDH11P55287 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH11P55287 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDH11P55287 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH11P55287 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms