Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H2P55055 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.31■□□□□ 0.68
NR1H2P55055 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H2P55055 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.31■□□□□ 0.68
NR1H2P55055 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NR1H2P55055 IGHV3-19-201ENST00000521488 291 ntBASIC19.31■□□□□ 0.68
NR1H2P55055 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H2P55055 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.31■□□□□ 0.68
NR1H2P55055 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.31■□□□□ 0.68
NR1H2P55055 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NR1H2P55055 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.31■□□□□ 0.68
NR1H2P55055 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NR1H2P55055 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H2P55055 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NR1H2P55055 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.31■□□□□ 0.68
NR1H2P55055 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H2P55055 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.3■□□□□ 0.68
NR1H2P55055 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
NR1H2P55055 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H2P55055 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H2P55055 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.3■□□□□ 0.68
NR1H2P55055 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H2P55055 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H2P55055 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.3■□□□□ 0.68
NR1H2P55055 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H2P55055 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.3■□□□□ 0.68
NR1H2P55055 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H2P55055 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H2P55055 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H2P55055 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H2P55055 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
NR1H2P55055 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H2P55055 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H2P55055 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NR1H2P55055 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H2P55055 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.29■□□□□ 0.68
NR1H2P55055 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H2P55055 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H2P55055 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H2P55055 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H2P55055 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H2P55055 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.29■□□□□ 0.68
NR1H2P55055 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.29■□□□□ 0.68
NR1H2P55055 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.29■□□□□ 0.68
NR1H2P55055 AL358852.1-201ENST00000623174 1268 ntBASIC19.29■□□□□ 0.68
NR1H2P55055 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.29■□□□□ 0.68
NR1H2P55055 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H2P55055 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H2P55055 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H2P55055 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.29■□□□□ 0.68
NR1H2P55055 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.29■□□□□ 0.68
NR1H2P55055 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H2P55055 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H2P55055 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.29■□□□□ 0.68
NR1H2P55055 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
NR1H2P55055 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR1H2P55055 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NR1H2P55055 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NR1H2P55055 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.28■□□□□ 0.68
NR1H2P55055 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H2P55055 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.28■□□□□ 0.68
NR1H2P55055 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H2P55055 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.28■□□□□ 0.68
NR1H2P55055 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NR1H2P55055 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.28■□□□□ 0.68
NR1H2P55055 OR2I1P-207ENST00000453522 948 ntBASIC19.28■□□□□ 0.68
NR1H2P55055 AL162430.1-201ENST00000480705 870 ntBASIC19.28■□□□□ 0.68
NR1H2P55055 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.28■□□□□ 0.68
NR1H2P55055 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H2P55055 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.28■□□□□ 0.68
NR1H2P55055 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H2P55055 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H2P55055 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H2P55055 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.28■□□□□ 0.68
NR1H2P55055 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR1H2P55055 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H2P55055 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H2P55055 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NR1H2P55055 AL162377.1-201ENST00000618844 1793 ntBASIC19.27■□□□□ 0.68
NR1H2P55055 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.27■□□□□ 0.68
NR1H2P55055 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.27■□□□□ 0.68
NR1H2P55055 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H2P55055 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H2P55055 YBX1P1-201ENST00000445822 960 ntBASIC19.27■□□□□ 0.68
NR1H2P55055 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
NR1H2P55055 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H2P55055 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H2P55055 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NR1H2P55055 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NR1H2P55055 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.27■□□□□ 0.67
NR1H2P55055 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NR1H2P55055 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.26■□□□□ 0.67
NR1H2P55055 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
NR1H2P55055 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.26■□□□□ 0.67
NR1H2P55055 PLK5-205ENST00000642079 1969 ntBASIC19.26■□□□□ 0.67
NR1H2P55055 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H2P55055 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.26■□□□□ 0.67
NR1H2P55055 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
NR1H2P55055 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H2P55055 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms