Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.81■□□□□ 0.92
ATXN3P54252 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.81■□□□□ 0.92
ATXN3P54252 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN3P54252 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ATXN3P54252 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.81■□□□□ 0.92
ATXN3P54252 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ATXN3P54252 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.81■□□□□ 0.92
ATXN3P54252 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.81■□□□□ 0.92
ATXN3P54252 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN3P54252 AF106564.1-201ENST00000607058 2553 ntBASIC20.81■□□□□ 0.92
ATXN3P54252 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN3P54252 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.81■□□□□ 0.92
ATXN3P54252 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATXN3P54252 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.8■□□□□ 0.92
ATXN3P54252 AC026366.1-201ENST00000488803 879 ntBASIC20.8■□□□□ 0.92
ATXN3P54252 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.8■□□□□ 0.92
ATXN3P54252 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.8■□□□□ 0.92
ATXN3P54252 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ATXN3P54252 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
ATXN3P54252 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
ATXN3P54252 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATXN3P54252 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN3P54252 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN3P54252 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN3P54252 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
ATXN3P54252 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN3P54252 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN3P54252 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN3P54252 LSM12P1-201ENST00000411836 588 ntBASIC20.79■□□□□ 0.92
ATXN3P54252 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.79■□□□□ 0.92
ATXN3P54252 AL162412.1-201ENST00000567129 965 ntBASIC20.79■□□□□ 0.92
ATXN3P54252 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN3P54252 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.79■□□□□ 0.92
ATXN3P54252 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN3P54252 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN3P54252 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.79■□□□□ 0.92
ATXN3P54252 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.79■□□□□ 0.92
ATXN3P54252 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATXN3P54252 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3P54252 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ATXN3P54252 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3P54252 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3P54252 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3P54252 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3P54252 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3P54252 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.78■□□□□ 0.92
ATXN3P54252 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ATXN3P54252 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.78■□□□□ 0.92
ATXN3P54252 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3P54252 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.78■□□□□ 0.92
ATXN3P54252 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.78■□□□□ 0.92
ATXN3P54252 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3P54252 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3P54252 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3P54252 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATXN3P54252 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ATXN3P54252 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3P54252 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3P54252 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ATXN3P54252 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3P54252 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3P54252 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3P54252 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.77■□□□□ 0.92
ATXN3P54252 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3P54252 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.77■□□□□ 0.92
ATXN3P54252 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.77■□□□□ 0.92
ATXN3P54252 AP003097.1-201ENST00000530657 1135 ntBASIC20.77■□□□□ 0.92
ATXN3P54252 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ATXN3P54252 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
ATXN3P54252 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3P54252 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.77■□□□□ 0.92
ATXN3P54252 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3P54252 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3P54252 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATXN3P54252 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATXN3P54252 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
ATXN3P54252 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3P54252 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
ATXN3P54252 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3P54252 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3P54252 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3P54252 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3P54252 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN3P54252 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms