Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLNS1AP54105 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLNS1AP54105 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
CLNS1AP54105 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.27■□□□□ 0.83
CLNS1AP54105 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLNS1AP54105 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLNS1AP54105 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.26■□□□□ 0.83
CLNS1AP54105 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.26■□□□□ 0.83
CLNS1AP54105 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.26■□□□□ 0.83
CLNS1AP54105 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLNS1AP54105 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLNS1AP54105 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
CLNS1AP54105 SLC47A1P1-202ENST00000449666 945 ntBASIC20.26■□□□□ 0.83
CLNS1AP54105 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.26■□□□□ 0.83
CLNS1AP54105 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.26■□□□□ 0.83
CLNS1AP54105 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.26■□□□□ 0.83
CLNS1AP54105 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLNS1AP54105 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLNS1AP54105 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLNS1AP54105 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLNS1AP54105 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLNS1AP54105 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLNS1AP54105 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLNS1AP54105 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLNS1AP54105 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLNS1AP54105 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLNS1AP54105 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.25■□□□□ 0.83
CLNS1AP54105 MIR4466-201ENST00000606121 54 ntBASIC20.25■□□□□ 0.83
CLNS1AP54105 NEFHP1-201ENST00000412845 2629 ntBASIC20.25■□□□□ 0.83
CLNS1AP54105 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.25■□□□□ 0.83
CLNS1AP54105 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLNS1AP54105 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLNS1AP54105 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLNS1AP54105 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLNS1AP54105 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLNS1AP54105 AP000974.1-201ENST00000623909 2387 ntBASIC20.24■□□□□ 0.83
CLNS1AP54105 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.24■□□□□ 0.83
CLNS1AP54105 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.24■□□□□ 0.83
CLNS1AP54105 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLNS1AP54105 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.24■□□□□ 0.83
CLNS1AP54105 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.24■□□□□ 0.83
CLNS1AP54105 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CLNS1AP54105 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.24■□□□□ 0.83
CLNS1AP54105 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.24■□□□□ 0.83
CLNS1AP54105 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.24■□□□□ 0.83
CLNS1AP54105 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLNS1AP54105 AC003102.1-202ENST00000563394 1796 ntBASIC20.23■□□□□ 0.83
CLNS1AP54105 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.23■□□□□ 0.83
CLNS1AP54105 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
CLNS1AP54105 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLNS1AP54105 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CLNS1AP54105 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CLNS1AP54105 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.23■□□□□ 0.83
CLNS1AP54105 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLNS1AP54105 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.23■□□□□ 0.83
CLNS1AP54105 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.23■□□□□ 0.83
CLNS1AP54105 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CLNS1AP54105 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.23■□□□□ 0.83
CLNS1AP54105 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms