Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 YDL011CYDL011C 324 nt3.72□□□□□ -1.81
NRD1P53617 YEL073CYEL073C 324 nt3.72□□□□□ -1.81
NRD1P53617 SRL3YKR091W 741 nt3.72□□□□□ -1.81 RIP-Chip
NRD1P53617 YLR282CYLR282C 342 nt3.72□□□□□ -1.81
NRD1P53617 YOR073W-AYOR073W-A 234 nt3.72□□□□□ -1.81
NRD1P53617 YJR030CYJR030C 2238 nt3.72□□□□□ -1.81
NRD1P53617 FYV10YIL097W 1551 nt3.72□□□□□ -1.81
NRD1P53617 DIP2YLR129W 2832 nt3.71□□□□□ -1.81
NRD1P53617 SYF1YDR416W 2580 nt3.71□□□□□ -1.81
NRD1P53617 TCB3YML072C 4638 nt3.71□□□□□ -1.81
NRD1P53617 RPO31YOR116C 4383 nt3.71□□□□□ -1.82
NRD1P53617 CSE2YNR010W 450 nt3.71□□□□□ -1.82
NRD1P53617 SGF11YPL047W 300 nt3.71□□□□□ -1.82 RIP-Chip
NRD1P53617 DIB1YPR082C 432 nt3.71□□□□□ -1.82 RIP-Chip
NRD1P53617 RDS1YCR106W 2499 nt3.71□□□□□ -1.82
NRD1P53617 SEC5YDR166C 2916 nt3.71□□□□□ -1.82
NRD1P53617 GLN4YOR168W 2430 nt3.7□□□□□ -1.82
NRD1P53617 RPC11YDR045C 333 nt3.7□□□□□ -1.82
NRD1P53617 RPS24AYER074W 408 nt3.7□□□□□ -1.82 RIP-Chip
NRD1P53617 RPC10YHR143W-A 213 nt3.7□□□□□ -1.82 RIP-Chip
NRD1P53617 PIS1YPR113W 663 nt3.7□□□□□ -1.82
NRD1P53617 CHD1YER164W 4407 nt3.69□□□□□ -1.82
NRD1P53617 TIM13YGR181W 318 nt3.69□□□□□ -1.82
NRD1P53617 YIR030W-AYIR030W-A 384 nt3.69□□□□□ -1.82
NRD1P53617 RPA12YJR063W 378 nt3.69□□□□□ -1.82 RIP-Chip
NRD1P53617 RPS27AYKL156W 249 nt3.69□□□□□ -1.82
NRD1P53617 ILV5YLR355C 1188 nt3.69□□□□□ -1.82
NRD1P53617 PUT2YHR037W 1728 nt3.69□□□□□ -1.82
NRD1P53617 SWH1YAR042W 3567 nt3.69□□□□□ -1.82 RIP-Chip
NRD1P53617 ZDS1YMR273C 2748 nt3.69□□□□□ -1.82
NRD1P53617 MDM32YOR147W 1869 nt3.69□□□□□ -1.82
NRD1P53617 RIM13YMR154C 2184 nt3.68□□□□□ -1.82 RIP-Chip
NRD1P53617 YER188C-AYER188C-A 300 nt3.68□□□□□ -1.82
NRD1P53617 YAL065CYAL065C 387 nt3.68□□□□□ -1.82
NRD1P53617 COP1YDL145C 3606 nt3.68□□□□□ -1.82
NRD1P53617 AEP3YPL005W 1821 nt3.67□□□□□ -1.82
NRD1P53617 OAF1YAL051W 3144 nt3.67□□□□□ -1.82
NRD1P53617 MDM20YOL076W 2391 nt3.67□□□□□ -1.82
NRD1P53617 YGR242WYGR242W 309 nt3.67□□□□□ -1.82
NRD1P53617 BCD1YHR040W 1101 nt3.67□□□□□ -1.82
NRD1P53617 LSM1YJL124C 519 nt3.67□□□□□ -1.82
NRD1P53617 YJR112W-AYJR112W-A 330 nt3.67□□□□□ -1.82 RIP-Chip
NRD1P53617 YKL111CYKL111C 336 nt3.67□□□□□ -1.82
NRD1P53617 RPS22BYLR367W 393 nt3.67□□□□□ -1.82 RIP-Chip
NRD1P53617 GOT1YMR292W 417 nt3.67□□□□□ -1.82 RIP-Chip
NRD1P53617 HSP10YOR020C 321 nt3.67□□□□□ -1.82
NRD1P53617 HHT1YBR010W 411 nt3.67□□□□□ -1.82
NRD1P53617 URC2YDR520C 2319 nt3.66□□□□□ -1.82
NRD1P53617 YER078W-AYER078W-A 165 nt3.66□□□□□ -1.82
NRD1P53617 RPS26BYER131W 360 nt3.66□□□□□ -1.82
NRD1P53617 TMA19YKL056C 504 nt3.66□□□□□ -1.82
NRD1P53617 RPL32YBL092W 393 nt3.66□□□□□ -1.82
NRD1P53617 SLA1YBL007C 3735 nt3.66□□□□□ -1.82
NRD1P53617 JEN1YKL217W 1851 nt3.66□□□□□ -1.82
NRD1P53617 NAN1YPL126W 2691 nt3.66□□□□□ -1.82
NRD1P53617 HDA2YDR295C 2025 nt3.65□□□□□ -1.82
NRD1P53617 ABP140YOR239W 1887 nt3.65□□□□□ -1.82
NRD1P53617 HMG1YML075C 3165 nt3.65□□□□□ -1.83 RIP-Chip
NRD1P53617 snR74snR74 88 nt3.65□□□□□ -1.83
NRD1P53617 ACM1YPL267W 630 nt3.65□□□□□ -1.83
NRD1P53617 PRS5YOL061W 1491 nt3.65□□□□□ -1.83
NRD1P53617 MSD1YPL104W 1977 nt3.65□□□□□ -1.83
NRD1P53617 YGR250CYGR250C 2346 nt3.65□□□□□ -1.83
NRD1P53617 RRN6YBL014C 2685 nt3.65□□□□□ -1.83
NRD1P53617 OSH2YDL019C 3852 nt3.65□□□□□ -1.83
NRD1P53617 BUD6YLR319C 2367 nt3.65□□□□□ -1.83
NRD1P53617 PDE2YOR360C 1581 nt3.64□□□□□ -1.83
NRD1P53617 CCW14YLR390W-A 717 nt3.64□□□□□ -1.83
NRD1P53617 YGL140CYGL140C 3660 nt3.64□□□□□ -1.83
NRD1P53617 SYO1YDL063C 1863 nt3.64□□□□□ -1.83
NRD1P53617 VPS41YDR080W 2979 nt3.63□□□□□ -1.83
NRD1P53617 RNA14YMR061W 2034 nt3.63□□□□□ -1.83
NRD1P53617 GPP2YER062C 753 nt3.63□□□□□ -1.83 RIP-Chip
NRD1P53617 YKR033CYKR033C 426 nt3.63□□□□□ -1.83
NRD1P53617 YNL211CYNL211C 261 nt3.63□□□□□ -1.83
NRD1P53617 YPR092WYPR092W 306 nt3.63□□□□□ -1.83
NRD1P53617 APE2YKL157W 2859 nt3.63□□□□□ -1.83
NRD1P53617 TFC8YPL007C 1767 nt3.63□□□□□ -1.83
NRD1P53617 PAN3YKL025C 2040 nt3.63□□□□□ -1.83
NRD1P53617 ICR1ICR1 3199 nt3.63□□□□□ -1.83
NRD1P53617 YPR003CYPR003C 2265 nt3.63□□□□□ -1.83
NRD1P53617 REV1YOR346W 2958 nt3.63□□□□□ -1.83 RIP-Chip
NRD1P53617 ELM1YKL048C 1923 nt3.62□□□□□ -1.83
NRD1P53617 ARF1YDL192W 546 nt3.62□□□□□ -1.83
NRD1P53617 YER121WYER121W 345 nt3.62□□□□□ -1.83
NRD1P53617 ATP7YKL016C 525 nt3.62□□□□□ -1.83
NRD1P53617 RDN58-1RDN58-1 158 nt3.62□□□□□ -1.83
NRD1P53617 RDN58-2RDN58-2 158 nt3.62□□□□□ -1.83
NRD1P53617 YPL080CYPL080C 327 nt3.62□□□□□ -1.83
NRD1P53617 TPD3YAL016W 1908 nt3.62□□□□□ -1.83
NRD1P53617 KIP3YGL216W 2418 nt3.61□□□□□ -1.83
NRD1P53617 SPB1YCL054W 2526 nt3.61□□□□□ -1.83
NRD1P53617 RPS8BYER102W 603 nt3.61□□□□□ -1.83
NRD1P53617 PFY1YOR122C 381 nt3.61□□□□□ -1.83 RIP-Chip
NRD1P53617 TRS120YDR407C 3870 nt3.61□□□□□ -1.83
NRD1P53617 PEX5YDR244W 1839 nt3.6□□□□□ -1.83
NRD1P53617 IPT1YDR072C 1584 nt3.6□□□□□ -1.83
NRD1P53617 VPS53YJL029C 2469 nt3.6□□□□□ -1.83
NRD1P53617 YCR081C-AYCR081C-A 237 nt3.6□□□□□ -1.83
NRD1P53617 YIL141WYIL141W 390 nt3.6□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 30.7 ms