Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRIM2P49643 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
PRIM2P49643 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRIM2P49643 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRIM2P49643 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRIM2P49643 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRIM2P49643 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRIM2P49643 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRIM2P49643 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PRIM2P49643 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PRIM2P49643 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRIM2P49643 KRT16P2-201ENST00000414673 1423 ntBASIC19.41■□□□□ 0.7
PRIM2P49643 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRIM2P49643 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRIM2P49643 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRIM2P49643 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PRIM2P49643 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRIM2P49643 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PRIM2P49643 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
PRIM2P49643 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PRIM2P49643 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRIM2P49643 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRIM2P49643 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRIM2P49643 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRIM2P49643 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRIM2P49643 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.4■□□□□ 0.7
PRIM2P49643 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.4■□□□□ 0.7
PRIM2P49643 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRIM2P49643 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRIM2P49643 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRIM2P49643 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRIM2P49643 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PRIM2P49643 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.39■□□□□ 0.7
PRIM2P49643 FP700111.2-201ENST00000619190 1892 ntBASIC19.39■□□□□ 0.7
PRIM2P49643 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PRIM2P49643 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRIM2P49643 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.39■□□□□ 0.69
PRIM2P49643 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRIM2P49643 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRIM2P49643 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRIM2P49643 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
PRIM2P49643 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRIM2P49643 AP001160.3-201ENST00000601484 763 ntBASIC19.39■□□□□ 0.69
PRIM2P49643 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRIM2P49643 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PRIM2P49643 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRIM2P49643 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRIM2P49643 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.39■□□□□ 0.69
PRIM2P49643 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRIM2P49643 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.39■□□□□ 0.69
PRIM2P49643 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRIM2P49643 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRIM2P49643 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRIM2P49643 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRIM2P49643 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRIM2P49643 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.38■□□□□ 0.69
PRIM2P49643 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PRIM2P49643 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRIM2P49643 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PRIM2P49643 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRIM2P49643 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.38■□□□□ 0.69
PRIM2P49643 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRIM2P49643 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRIM2P49643 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRIM2P49643 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
PRIM2P49643 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRIM2P49643 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRIM2P49643 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.38■□□□□ 0.69
PRIM2P49643 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRIM2P49643 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.38■□□□□ 0.69
PRIM2P49643 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.38■□□□□ 0.69
PRIM2P49643 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
PRIM2P49643 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRIM2P49643 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRIM2P49643 AC011484.1-201ENST00000377652 1995 ntBASIC19.37■□□□□ 0.69
PRIM2P49643 AC027702.1-201ENST00000563810 1770 ntBASIC19.37■□□□□ 0.69
PRIM2P49643 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.37■□□□□ 0.69
PRIM2P49643 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRIM2P49643 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRIM2P49643 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PRIM2P49643 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.37■□□□□ 0.69
PRIM2P49643 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRIM2P49643 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRIM2P49643 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRIM2P49643 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PRIM2P49643 AC245052.3-201ENST00000450182 901 ntBASIC19.37■□□□□ 0.69
PRIM2P49643 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.37■□□□□ 0.69
PRIM2P49643 KRT18P20-201ENST00000548986 1279 ntBASIC19.37■□□□□ 0.69
PRIM2P49643 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PRIM2P49643 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PRIM2P49643 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRIM2P49643 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
PRIM2P49643 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRIM2P49643 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRIM2P49643 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PRIM2P49643 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PRIM2P49643 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PRIM2P49643 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRIM2P49643 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PRIM2P49643 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms