Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.96■□□□□ 0.47
SOX2P48431 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX2P48431 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX2P48431 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX2P48431 AP004607.4-201ENST00000530158 1459 ntBASIC17.96■□□□□ 0.47
SOX2P48431 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.96■□□□□ 0.47
SOX2P48431 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX2P48431 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX2P48431 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX2P48431 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX2P48431 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX2P48431 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX2P48431 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX2P48431 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX2P48431 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX2P48431 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.96■□□□□ 0.47
SOX2P48431 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX2P48431 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX2P48431 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
SOX2P48431 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX2P48431 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX2P48431 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SOX2P48431 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SOX2P48431 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX2P48431 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SOX2P48431 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX2P48431 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SOX2P48431 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SOX2P48431 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SOX2P48431 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.96■□□□□ 0.46
SOX2P48431 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX2P48431 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX2P48431 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX2P48431 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX2P48431 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX2P48431 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SOX2P48431 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX2P48431 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX2P48431 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX2P48431 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SOX2P48431 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX2P48431 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX2P48431 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX2P48431 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX2P48431 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SOX2P48431 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SOX2P48431 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX2P48431 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX2P48431 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX2P48431 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX2P48431 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX2P48431 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX2P48431 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX2P48431 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX2P48431 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SOX2P48431 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX2P48431 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SOX2P48431 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.94■□□□□ 0.46
SOX2P48431 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SOX2P48431 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.94■□□□□ 0.46
SOX2P48431 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SOX2P48431 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.94■□□□□ 0.46
SOX2P48431 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX2P48431 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.94■□□□□ 0.46
SOX2P48431 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.94■□□□□ 0.46
SOX2P48431 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX2P48431 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX2P48431 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SOX2P48431 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX2P48431 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX2P48431 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX2P48431 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX2P48431 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.94■□□□□ 0.46
SOX2P48431 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX2P48431 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
SOX2P48431 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SOX2P48431 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SOX2P48431 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX2P48431 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SOX2P48431 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
SOX2P48431 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
SOX2P48431 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX2P48431 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX2P48431 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SOX2P48431 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.93■□□□□ 0.46
SOX2P48431 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX2P48431 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX2P48431 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.93■□□□□ 0.46
SOX2P48431 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SOX2P48431 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX2P48431 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX2P48431 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
SOX2P48431 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.93■□□□□ 0.46
SOX2P48431 AC053503.5-201ENST00000601508 636 ntBASIC17.93■□□□□ 0.46
SOX2P48431 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX2P48431 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.93■□□□□ 0.46
SOX2P48431 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.93■□□□□ 0.46
SOX2P48431 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX2P48431 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SOX2P48431 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms