Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX5P45973 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX5P45973 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CBX5P45973 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.55■□□□□ 0.4
CBX5P45973 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.55■□□□□ 0.4
CBX5P45973 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CBX5P45973 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX5P45973 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX5P45973 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CBX5P45973 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.55■□□□□ 0.4
CBX5P45973 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CBX5P45973 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.55■□□□□ 0.4
CBX5P45973 DUX4L19-201ENST00000557448 1267 ntBASIC17.55■□□□□ 0.4
CBX5P45973 MIR3621-201ENST00000580529 85 ntBASIC17.55■□□□□ 0.4
CBX5P45973 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.55■□□□□ 0.4
CBX5P45973 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX5P45973 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CBX5P45973 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CBX5P45973 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX5P45973 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX5P45973 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX5P45973 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX5P45973 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CBX5P45973 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.54■□□□□ 0.4
CBX5P45973 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
CBX5P45973 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.54■□□□□ 0.4
CBX5P45973 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.54■□□□□ 0.4
CBX5P45973 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX5P45973 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.54■□□□□ 0.4
CBX5P45973 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CBX5P45973 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CBX5P45973 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.53■□□□□ 0.4
CBX5P45973 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX5P45973 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX5P45973 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.53■□□□□ 0.4
CBX5P45973 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX5P45973 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CBX5P45973 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX5P45973 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CBX5P45973 AC136469.2-201ENST00000623944 1028 ntBASIC17.53■□□□□ 0.4
CBX5P45973 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.53■□□□□ 0.4
CBX5P45973 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX5P45973 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.53■□□□□ 0.4
CBX5P45973 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CBX5P45973 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CBX5P45973 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CBX5P45973 BCL2-203ENST00000589955 5011 ntBASIC17.53■□□□□ 0.4
CBX5P45973 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CBX5P45973 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CBX5P45973 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CBX5P45973 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CBX5P45973 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX5P45973 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX5P45973 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CBX5P45973 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX5P45973 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.52■□□□□ 0.4
CBX5P45973 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.52■□□□□ 0.4
CBX5P45973 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.52■□□□□ 0.4
CBX5P45973 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX5P45973 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.52■□□□□ 0.4
CBX5P45973 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CBX5P45973 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CBX5P45973 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX5P45973 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX5P45973 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.52■□□□□ 0.39
CBX5P45973 SYT6-210ENST00000641643 1587 ntBASIC17.52■□□□□ 0.39
CBX5P45973 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CBX5P45973 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CBX5P45973 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX5P45973 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX5P45973 AC087289.5-201ENST00000586076 3175 ntBASIC17.52■□□□□ 0.39
CBX5P45973 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.52■□□□□ 0.39
CBX5P45973 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CBX5P45973 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.52■□□□□ 0.39
CBX5P45973 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.52■□□□□ 0.39
CBX5P45973 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.52■□□□□ 0.39
CBX5P45973 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX5P45973 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CBX5P45973 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CBX5P45973 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CBX5P45973 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CBX5P45973 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CBX5P45973 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CBX5P45973 RARRES2P1-201ENST00000474487 481 ntBASIC17.51■□□□□ 0.39
CBX5P45973 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.51■□□□□ 0.39
CBX5P45973 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.51■□□□□ 0.39
CBX5P45973 AC011298.3-201ENST00000615796 283 ntBASIC17.51■□□□□ 0.39
CBX5P45973 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms