Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.38■□□□□ 0.85
CTSKP43235 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.38■□□□□ 0.85
CTSKP43235 AC092368.3-202ENST00000574180 1591 ntBASIC20.38■□□□□ 0.85
CTSKP43235 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.37■□□□□ 0.85
CTSKP43235 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.37■□□□□ 0.85
CTSKP43235 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CTSKP43235 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.37■□□□□ 0.85
CTSKP43235 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 SLC25A24-204ENST00000569674 2357 ntBASIC20.37■□□□□ 0.85
CTSKP43235 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTSKP43235 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.37■□□□□ 0.85
CTSKP43235 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.37■□□□□ 0.85
CTSKP43235 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTSKP43235 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.36■□□□□ 0.85
CTSKP43235 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.36■□□□□ 0.85
CTSKP43235 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CTSKP43235 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.36■□□□□ 0.85
CTSKP43235 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTSKP43235 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.36■□□□□ 0.85
CTSKP43235 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.36■□□□□ 0.85
CTSKP43235 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.36■□□□□ 0.85
CTSKP43235 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTSKP43235 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTSKP43235 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTSKP43235 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.36■□□□□ 0.85
CTSKP43235 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.36■□□□□ 0.85
CTSKP43235 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTSKP43235 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTSKP43235 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTSKP43235 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.35■□□□□ 0.85
CTSKP43235 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTSKP43235 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTSKP43235 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CTSKP43235 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTSKP43235 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.35■□□□□ 0.85
CTSKP43235 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.35■□□□□ 0.85
CTSKP43235 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CTSKP43235 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTSKP43235 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTSKP43235 KRT17P3-201ENST00000420566 1262 ntBASIC20.35■□□□□ 0.85
CTSKP43235 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.35■□□□□ 0.85
CTSKP43235 RPPH1-201ENST00000516869 333 ntBASIC20.35■□□□□ 0.85
CTSKP43235 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.35■□□□□ 0.85
CTSKP43235 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.35■□□□□ 0.85
CTSKP43235 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.35■□□□□ 0.85
CTSKP43235 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.35■□□□□ 0.85
CTSKP43235 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.35■□□□□ 0.85
CTSKP43235 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTSKP43235 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CTSKP43235 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTSKP43235 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.34■□□□□ 0.85
CTSKP43235 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.34■□□□□ 0.85
CTSKP43235 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSKP43235 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.34■□□□□ 0.85
CTSKP43235 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTSKP43235 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSKP43235 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSKP43235 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSKP43235 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSKP43235 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.34■□□□□ 0.85
CTSKP43235 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSKP43235 CYP21A1P-202ENST00000354927 1481 ntBASIC20.34■□□□□ 0.85
CTSKP43235 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSKP43235 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSKP43235 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSKP43235 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTSKP43235 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTSKP43235 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTSKP43235 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTSKP43235 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTSKP43235 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.33■□□□□ 0.85
CTSKP43235 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CTSKP43235 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CTSKP43235 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.33■□□□□ 0.85
CTSKP43235 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTSKP43235 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CTSKP43235 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.33■□□□□ 0.85
CTSKP43235 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.33■□□□□ 0.85
CTSKP43235 C1QBPP2-201ENST00000528754 825 ntBASIC20.33■□□□□ 0.85
CTSKP43235 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTSKP43235 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.33■□□□□ 0.85
CTSKP43235 RN7SL471P-201ENST00000580476 299 ntBASIC20.33■□□□□ 0.85
CTSKP43235 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.33■□□□□ 0.85
CTSKP43235 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CTSKP43235 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.33■□□□□ 0.84
CTSKP43235 FAM99A-202ENST00000538190 1989 ntBASIC20.33■□□□□ 0.84
CTSKP43235 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTSKP43235 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.33■□□□□ 0.84
CTSKP43235 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms