Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNFP41002 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNFP41002 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.56■□□□□ 0.88
CCNFP41002 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNFP41002 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCNFP41002 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCNFP41002 AC138907.5-202ENST00000569484 235 ntBASIC20.56■□□□□ 0.88
CCNFP41002 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNFP41002 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.56■□□□□ 0.88
CCNFP41002 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCNFP41002 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNFP41002 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNFP41002 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCNFP41002 AP004607.4-201ENST00000530158 1459 ntBASIC20.56■□□□□ 0.88
CCNFP41002 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNFP41002 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNFP41002 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CCNFP41002 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNFP41002 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCNFP41002 PCDHAC2-203ENST00000615316 3011 ntBASIC20.55■□□□□ 0.88
CCNFP41002 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCNFP41002 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCNFP41002 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNFP41002 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.55■□□□□ 0.88
CCNFP41002 MIR935-201ENST00000401179 91 ntBASIC20.55■□□□□ 0.88
CCNFP41002 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.55■□□□□ 0.88
CCNFP41002 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.55■□□□□ 0.88
CCNFP41002 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.55■□□□□ 0.88
CCNFP41002 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.55■□□□□ 0.88
CCNFP41002 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.55■□□□□ 0.88
CCNFP41002 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.55■□□□□ 0.88
CCNFP41002 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNFP41002 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNFP41002 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.55■□□□□ 0.88
CCNFP41002 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.55■□□□□ 0.88
CCNFP41002 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCNFP41002 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.55■□□□□ 0.88
CCNFP41002 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCNFP41002 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNFP41002 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.54■□□□□ 0.88
CCNFP41002 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNFP41002 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCNFP41002 AC004854.2-201ENST00000608450 1441 ntBASIC20.54■□□□□ 0.88
CCNFP41002 AC112907.3-201ENST00000577781 2400 ntBASIC20.54■□□□□ 0.88
CCNFP41002 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCNFP41002 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNFP41002 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNFP41002 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCNFP41002 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.54■□□□□ 0.88
CCNFP41002 KRT19P1-201ENST00000405746 1186 ntBASIC20.54■□□□□ 0.88
CCNFP41002 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.54■□□□□ 0.88
CCNFP41002 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CCNFP41002 NTF6G-201ENST00000591094 616 ntBASIC20.54■□□□□ 0.88
CCNFP41002 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.54■□□□□ 0.88
CCNFP41002 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.54■□□□□ 0.88
CCNFP41002 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.54■□□□□ 0.88
CCNFP41002 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CCNFP41002 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNFP41002 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCNFP41002 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNFP41002 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.53■□□□□ 0.88
CCNFP41002 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.53■□□□□ 0.88
CCNFP41002 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.53■□□□□ 0.88
CCNFP41002 AC104187.1-201ENST00000607510 612 ntBASIC20.53■□□□□ 0.88
CCNFP41002 AC008175.2-201ENST00000612840 297 ntBASIC20.53■□□□□ 0.88
CCNFP41002 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CCNFP41002 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.53■□□□□ 0.88
CCNFP41002 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCNFP41002 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCNFP41002 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCNFP41002 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCNFP41002 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCNFP41002 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCNFP41002 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.52■□□□□ 0.88
CCNFP41002 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCNFP41002 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.52■□□□□ 0.88
CCNFP41002 POU5F1P4-201ENST00000413175 1085 ntBASIC20.52■□□□□ 0.88
CCNFP41002 AC010141.2-201ENST00000452426 721 ntBASIC20.52■□□□□ 0.88
CCNFP41002 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.52■□□□□ 0.88
CCNFP41002 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.52■□□□□ 0.88
CCNFP41002 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCNFP41002 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CCNFP41002 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCNFP41002 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCNFP41002 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCNFP41002 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCNFP41002 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms