Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 WIP1YDR374W-A 270 nt3.84□□□□□ -1.79
MSH4P40965 RPL29YFR032C-A 180 nt3.84□□□□□ -1.79
MSH4P40965 COX23YHR116W 456 nt3.84□□□□□ -1.79
MSH4P40965 YBR085C-AYBR085C-A 258 nt3.84□□□□□ -1.79
MSH4P40965 SKP2YNL311C 2292 nt3.84□□□□□ -1.79
MSH4P40965 PAC1YOR269W 1485 nt3.84□□□□□ -1.8
MSH4P40965 XRN1YGL173C 4587 nt3.84□□□□□ -1.8
MSH4P40965 ATP22YDR350C 2055 nt3.83□□□□□ -1.8
MSH4P40965 SRB4YER022W 2064 nt3.83□□□□□ -1.8
MSH4P40965 RPC10YHR143W-A 213 nt3.83□□□□□ -1.8
MSH4P40965 RPB11YOL005C 363 nt3.83□□□□□ -1.8
MSH4P40965 STN1YDR082W 1485 nt3.83□□□□□ -1.8
MSH4P40965 SNX41YDR425W 1878 nt3.83□□□□□ -1.8
MSH4P40965 PKH1YDR490C 2301 nt3.83□□□□□ -1.8
MSH4P40965 POL3YDL102W 3294 nt3.83□□□□□ -1.8
MSH4P40965 YTA7YGR270W 4140 nt3.83□□□□□ -1.8
MSH4P40965 NUP60YAR002W 1620 nt3.82□□□□□ -1.8
MSH4P40965 YRB1YDR002W 606 nt3.82□□□□□ -1.8
MSH4P40965 YGL149WYGL149W 306 nt3.82□□□□□ -1.8
MSH4P40965 BAT1YHR208W 1182 nt3.82□□□□□ -1.8
MSH4P40965 PAU14YIL176C 363 nt3.82□□□□□ -1.8
MSH4P40965 PAU1YJL223C 363 nt3.82□□□□□ -1.8
MSH4P40965 RPL37AYLR185W 267 nt3.82□□□□□ -1.8
MSH4P40965 YPR108W-AYPR108W-A 213 nt3.82□□□□□ -1.8
MSH4P40965 TIM12YBR091C 330 nt3.82□□□□□ -1.8
MSH4P40965 YOR296WYOR296W 3870 nt3.82□□□□□ -1.8
MSH4P40965 RPA135YPR010C 3612 nt3.82□□□□□ -1.8
MSH4P40965 MDN1YLR106C 14733 nt3.81□□□□□ -1.8
MSH4P40965 URA2YJL130C 6645 nt3.81□□□□□ -1.8
MSH4P40965 FAP7YDL166C 594 nt3.81□□□□□ -1.8
MSH4P40965 RAD6YGL058W 519 nt3.81□□□□□ -1.8
MSH4P40965 APQ12YIL040W 417 nt3.81□□□□□ -1.8
MSH4P40965 YKL111CYKL111C 336 nt3.81□□□□□ -1.8
MSH4P40965 YLR458WYLR458W 381 nt3.81□□□□□ -1.8
MSH4P40965 RPL23AYBL087C 414 nt3.81□□□□□ -1.8
MSH4P40965 YOR170WYOR170W 306 nt3.81□□□□□ -1.8
MSH4P40965 JJJ2YJL162C 1752 nt3.81□□□□□ -1.8
MSH4P40965 RPN1YHR027C 2982 nt3.81□□□□□ -1.8
MSH4P40965 DOA4YDR069C 2781 nt3.8□□□□□ -1.8
MSH4P40965 YDL242WYDL242W 354 nt3.8□□□□□ -1.8
MSH4P40965 YER188C-AYER188C-A 300 nt3.8□□□□□ -1.8
MSH4P40965 URM1YIL008W 300 nt3.8□□□□□ -1.8
MSH4P40965 YIL066W-AYIL066W-A 444 nt3.8□□□□□ -1.8
MSH4P40965 PAM16YJL104W 450 nt3.8□□□□□ -1.8
MSH4P40965 MDV1YJL112W 2145 nt3.8□□□□□ -1.8
MSH4P40965 DBP10YDL031W 2988 nt3.8□□□□□ -1.8
MSH4P40965 VAS1YGR094W 3315 nt3.79□□□□□ -1.8
MSH4P40965 YDR344CYDR344C 444 nt3.79□□□□□ -1.8
MSH4P40965 YJR023CYJR023C 402 nt3.79□□□□□ -1.8
MSH4P40965 YJR140W-AYJR140W-A 150 nt3.79□□□□□ -1.8
MSH4P40965 ENA2YDR039C 3276 nt3.79□□□□□ -1.8
MSH4P40965 ENA1YDR040C 3276 nt3.79□□□□□ -1.8
MSH4P40965 MDM32YOR147W 1869 nt3.79□□□□□ -1.8
MSH4P40965 VTC4YJL012C 2166 nt3.79□□□□□ -1.8
MSH4P40965 DPB11YJL090C 2295 nt3.78□□□□□ -1.8
MSH4P40965 YDL007C-AYDL007C-A 258 nt3.78□□□□□ -1.8
MSH4P40965 YDL211CYDL211C 1119 nt3.78□□□□□ -1.8
MSH4P40965 PSY1YKL076C 384 nt3.78□□□□□ -1.8
MSH4P40965 RPL8BYLL045C 771 nt3.78□□□□□ -1.8
MSH4P40965 APC9YLR102C 798 nt3.78□□□□□ -1.8
MSH4P40965 RPS28BYLR264W 204 nt3.78□□□□□ -1.8
MSH4P40965 ABF2YMR072W 552 nt3.78□□□□□ -1.8
MSH4P40965 TOM70YNL121C 1854 nt3.77□□□□□ -1.81
MSH4P40965 tF(GAA)DtF(GAA)D 73 nt3.77□□□□□ -1.81
MSH4P40965 tF(GAA)NtF(GAA)N 73 nt3.77□□□□□ -1.81
MSH4P40965 TIF35YDR429C 825 nt3.77□□□□□ -1.81
MSH4P40965 IRC4YDR540C 540 nt3.77□□□□□ -1.81
MSH4P40965 TMA10YLR327C 261 nt3.77□□□□□ -1.81
MSH4P40965 YEL025CYEL025C 3567 nt3.77□□□□□ -1.81
MSH4P40965 ARP7YPR034W 1434 nt3.77□□□□□ -1.81
MSH4P40965 MES1YGR264C 2256 nt3.77□□□□□ -1.81
MSH4P40965 RKM1YPL208W 1752 nt3.76□□□□□ -1.81
MSH4P40965 SPP382YLR424W 2127 nt3.76□□□□□ -1.81
MSH4P40965 ALY1YKR021W 2748 nt3.76□□□□□ -1.81
MSH4P40965 PCF11YDR228C 1881 nt3.76□□□□□ -1.81
MSH4P40965 YGL041CYGL041C 204 nt3.76□□□□□ -1.81
MSH4P40965 YBL065WYBL065W 345 nt3.76□□□□□ -1.81
MSH4P40965 GIS2YNL255C 462 nt3.76□□□□□ -1.81
MSH4P40965 EGD1YPL037C 474 nt3.76□□□□□ -1.81
MSH4P40965 SWD3YBR175W 948 nt3.76□□□□□ -1.81
MSH4P40965 snR42snR42 351 nt3.76□□□□□ -1.81
MSH4P40965 snR49snR49 165 nt3.76□□□□□ -1.81
MSH4P40965 SLP1YOR154W 1764 nt3.76□□□□□ -1.81
MSH4P40965 DNM1YLL001W 2274 nt3.75□□□□□ -1.81
MSH4P40965 MIT1YEL007W 2001 nt3.75□□□□□ -1.81
MSH4P40965 TAF2YCR042C 4224 nt3.75□□□□□ -1.81
MSH4P40965 MBB1YJL199C 327 nt3.75□□□□□ -1.81
MSH4P40965 RPS21AYKR057W 264 nt3.75□□□□□ -1.81
MSH4P40965 SDH2YLL041C 801 nt3.75□□□□□ -1.81
MSH4P40965 GOT1YMR292W 417 nt3.75□□□□□ -1.81
MSH4P40965 SPO71YDR104C 3738 nt3.74□□□□□ -1.81
MSH4P40965 YLR012CYLR012C 300 nt3.74□□□□□ -1.81
MSH4P40965 PAU23YLR037C 375 nt3.74□□□□□ -1.81
MSH4P40965 TAR1YLR154W-C 375 nt3.74□□□□□ -1.81
MSH4P40965 DAD3YBR233W-A 285 nt3.74□□□□□ -1.81
MSH4P40965 SIZ1YDR409W 2715 nt3.74□□□□□ -1.81
MSH4P40965 RPA34YJL148W 702 nt3.73□□□□□ -1.81
MSH4P40965 FAR1YJL157C 2493 nt3.73□□□□□ -1.81
MSH4P40965 ARK1YNL020C 1917 nt3.73□□□□□ -1.81
MSH4P40965 VHR2YER064C 1518 nt3.73□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 33.7 ms