Protein–RNA interactions for Protein: P40486

SHQ1, Protein SHQ1, yeastyeast

Predicted RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHQ1P40486 ECM5YMR176W 4236 nt1.95□□□□□ -2.1
SHQ1P40486 YDR248CYDR248C 582 nt1.95□□□□□ -2.1
SHQ1P40486 PGD1YGL025C 1194 nt1.95□□□□□ -2.1
SHQ1P40486 YKR051WYKR051W 1257 nt1.95□□□□□ -2.1
SHQ1P40486 YOR392WYOR392W 444 nt1.95□□□□□ -2.1
SHQ1P40486 MED8YBR193C 672 nt1.95□□□□□ -2.1
SHQ1P40486 SSF1YHR066W 1362 nt1.95□□□□□ -2.1
SHQ1P40486 STD1YOR047C 1335 nt1.94□□□□□ -2.1
SHQ1P40486 MET18YIL128W 3099 nt1.94□□□□□ -2.1
SHQ1P40486 RSM18YER050C 417 nt1.94□□□□□ -2.1
SHQ1P40486 YPS5YGL259W 498 nt1.94□□□□□ -2.1
SHQ1P40486 YGR109W-AYGR109W-A 873 nt1.94□□□□□ -2.1
SHQ1P40486 YIL082WYIL082W 873 nt1.94□□□□□ -2.1
SHQ1P40486 YLR379WYLR379W 375 nt1.94□□□□□ -2.1
SHQ1P40486 POP7YBR167C 423 nt1.94□□□□□ -2.1
SHQ1P40486 PDR8YLR266C 2106 nt1.94□□□□□ -2.1
SHQ1P40486 BUD2YKL092C 3315 nt1.94□□□□□ -2.1
SHQ1P40486 ECM25YJL201W 1800 nt1.94□□□□□ -2.1
SHQ1P40486 PRK1YIL095W 2433 nt1.93□□□□□ -2.1
SHQ1P40486 IRC20YLR247C 4671 nt1.93□□□□□ -2.1
SHQ1P40486 Q0255Q0255 1419 nt1.93□□□□□ -2.1
SHQ1P40486 ARP7YPR034W 1434 nt1.93□□□□□ -2.1
SHQ1P40486 TRL1YJL087C 2484 nt1.93□□□□□ -2.1
SHQ1P40486 PBP4YDL053C 558 nt1.93□□□□□ -2.1
SHQ1P40486 YER068C-AYER068C-A 432 nt1.93□□□□□ -2.1
SHQ1P40486 YGL109WYGL109W 324 nt1.93□□□□□ -2.1
SHQ1P40486 PDP3YLR455W 915 nt1.93□□□□□ -2.1
SHQ1P40486 SRL4YPL033C 846 nt1.93□□□□□ -2.1
SHQ1P40486 IRC10YOL015W 1761 nt1.93□□□□□ -2.1
SHQ1P40486 MGA2YIR033W 3342 nt1.92□□□□□ -2.1
SHQ1P40486 snR83snR83 306 nt1.92□□□□□ -2.1
SHQ1P40486 UBC5YDR059C 447 nt1.92□□□□□ -2.1
SHQ1P40486 LCL2YLR104W 396 nt1.92□□□□□ -2.1
SHQ1P40486 OST2YOR103C 393 nt1.92□□□□□ -2.1
SHQ1P40486 AGC1YPR021C 2709 nt1.92□□□□□ -2.1
SHQ1P40486 TDA2YER071C 381 nt1.91□□□□□ -2.1
SHQ1P40486 YGL165CYGL165C 579 nt1.91□□□□□ -2.1
SHQ1P40486 YIP1YGR172C 747 nt1.91□□□□□ -2.1
SHQ1P40486 YIL058WYIL058W 285 nt1.91□□□□□ -2.1
SHQ1P40486 TMA7YLR262C-A 195 nt1.91□□□□□ -2.1
SHQ1P40486 SWM2YNR004W 441 nt1.91□□□□□ -2.1
SHQ1P40486 ASG1YIL130W 2895 nt1.9□□□□□ -2.1
SHQ1P40486 FMP16YDR070C 282 nt1.9□□□□□ -2.11
SHQ1P40486 YDR199WYDR199W 366 nt1.9□□□□□ -2.11
SHQ1P40486 NCB2YDR397C 441 nt1.9□□□□□ -2.11
SHQ1P40486 PRS3YHL011C 963 nt1.9□□□□□ -2.11
SHQ1P40486 SPO11YHL022C 1197 nt1.9□□□□□ -2.11
SHQ1P40486 RLP24YLR009W 600 nt1.9□□□□□ -2.11
SHQ1P40486 YPL034WYPL034W 498 nt1.9□□□□□ -2.11
SHQ1P40486 NIC96YFR002W 2520 nt1.9□□□□□ -2.11
SHQ1P40486 PEP1YBL017C 4740 nt1.9□□□□□ -2.11
SHQ1P40486 HER1YOR227W 3741 nt1.9□□□□□ -2.11
SHQ1P40486 UBP11YKR098C 2154 nt1.89□□□□□ -2.11
SHQ1P40486 YFR056CYFR056C 369 nt1.89□□□□□ -2.11
SHQ1P40486 SDL1YIL167W 633 nt1.89□□□□□ -2.11
SHQ1P40486 SHE2YKL130C 741 nt1.89□□□□□ -2.11
SHQ1P40486 YNL179CYNL179C 438 nt1.89□□□□□ -2.11
SHQ1P40486 ARL3YPL051W 597 nt1.89□□□□□ -2.11
SHQ1P40486 YBR063CYBR063C 1215 nt1.89□□□□□ -2.11
SHQ1P40486 YCL002CYCL002C 792 nt1.89□□□□□ -2.11
SHQ1P40486 CAT2YML042W 2013 nt1.88□□□□□ -2.11
SHQ1P40486 CDC60YPL160W 3273 nt1.88□□□□□ -2.11
SHQ1P40486 YCR081C-AYCR081C-A 237 nt1.88□□□□□ -2.11
SHQ1P40486 YDR115WYDR115W 318 nt1.88□□□□□ -2.11
SHQ1P40486 VPS74YDR372C 1038 nt1.88□□□□□ -2.11
SHQ1P40486 TSA2YDR453C 591 nt1.88□□□□□ -2.11
SHQ1P40486 IRC4YDR540C 540 nt1.88□□□□□ -2.11
SHQ1P40486 SDS22YKL193C 1017 nt1.88□□□□□ -2.11
SHQ1P40486 ATG38YLR211C 681 nt1.88□□□□□ -2.11
SHQ1P40486 PTC5YOR090C 1719 nt1.88□□□□□ -2.11
SHQ1P40486 snR5snR5 204 nt1.87□□□□□ -2.11
SHQ1P40486 MYO4YAL029C 4416 nt1.87□□□□□ -2.11
SHQ1P40486 REV1YOR346W 2958 nt1.87□□□□□ -2.11
SHQ1P40486 YJR098CYJR098C 1971 nt1.87□□□□□ -2.11
SHQ1P40486 FIG2YCR089W 4830 nt1.87□□□□□ -2.11
SHQ1P40486 CFT2YLR115W 2580 nt1.86□□□□□ -2.11
SHQ1P40486 snR59snR59 78 nt1.86□□□□□ -2.11
SHQ1P40486 YDL163WYDL163W 303 nt1.86□□□□□ -2.11
SHQ1P40486 RAM2YKL019W 951 nt1.86□□□□□ -2.11
SHQ1P40486 YKR075W-AYKR075W-A 270 nt1.86□□□□□ -2.11
SHQ1P40486 YML084WYML084W 309 nt1.86□□□□□ -2.11
SHQ1P40486 HHT2YNL031C 411 nt1.86□□□□□ -2.11
SHQ1P40486 YNL050CYNL050C 813 nt1.86□□□□□ -2.11
SHQ1P40486 GIM3YNL153C 390 nt1.86□□□□□ -2.11
SHQ1P40486 AHC2YCR082W 387 nt1.85□□□□□ -2.11
SHQ1P40486 COX13YGL191W 390 nt1.85□□□□□ -2.11
SHQ1P40486 ANS1YHR126C 480 nt1.85□□□□□ -2.11
SHQ1P40486 RPA34YJL148W 702 nt1.85□□□□□ -2.11
SHQ1P40486 YJR023CYJR023C 402 nt1.85□□□□□ -2.11
SHQ1P40486 YNL150WYNL150W 408 nt1.85□□□□□ -2.11
SHQ1P40486 RIO2YNL207W 1278 nt1.85□□□□□ -2.11
SHQ1P40486 YNL235CYNL235C 432 nt1.85□□□□□ -2.11
SHQ1P40486 ATP20YPR020W 348 nt1.85□□□□□ -2.11
SHQ1P40486 NDD1YOR372C 1665 nt1.85□□□□□ -2.11
SHQ1P40486 YFL002W-BYFL002W-B 1317 nt1.85□□□□□ -2.11
SHQ1P40486 YGR161W-AYGR161W-A 1317 nt1.85□□□□□ -2.11
SHQ1P40486 YBL100W-AYBL100W-A 1317 nt1.85□□□□□ -2.11
SHQ1P40486 YCL020WYCL020W 1317 nt1.85□□□□□ -2.11
SHQ1P40486 SHE4YOR035C 2370 nt1.85□□□□□ -2.11
SHQ1P40486 LRE1YCL051W 1752 nt1.85□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 23.3 ms