Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 SMB1YER029C 591 nt2.54□□□□□ -2
RPH1P39956 YHR032W-AYHR032W-A 180 nt2.54□□□□□ -2
RPH1P39956 CRG1YHR209W 876 nt2.54□□□□□ -2
RPH1P39956 EMC6YLL014W 327 nt2.54□□□□□ -2
RPH1P39956 IRC19YLL033W 693 nt2.54□□□□□ -2
RPH1P39956 PAU23YLR037C 375 nt2.54□□□□□ -2
RPH1P39956 YML084WYML084W 309 nt2.54□□□□□ -2
RPH1P39956 LSM2YBL026W 288 nt2.54□□□□□ -2
RPH1P39956 YOL150CYOL150C 312 nt2.54□□□□□ -2
RPH1P39956 MES1YGR264C 2256 nt2.53□□□□□ -2
RPH1P39956 SGS1YMR190C 4344 nt2.53□□□□□ -2
RPH1P39956 YPS5YGL259W 498 nt2.53□□□□□ -2
RPH1P39956 RPL36BYPL249C-A 303 nt2.53□□□□□ -2
RPH1P39956 UTP13YLR222C 2454 nt2.53□□□□□ -2
RPH1P39956 YCR081C-AYCR081C-A 237 nt2.52□□□□□ -2.01
RPH1P39956 ATG31YDR022C 591 nt2.52□□□□□ -2.01
RPH1P39956 RNR4YGR180C 1038 nt2.52□□□□□ -2.01
RPH1P39956 NBL1YHR199C-A 222 nt2.52□□□□□ -2.01
RPH1P39956 MRPL38YKL170W 417 nt2.52□□□□□ -2.01
RPH1P39956 CDC123YLR215C 1083 nt2.52□□□□□ -2.01
RPH1P39956 CDC33YOL139C 642 nt2.52□□□□□ -2.01
RPH1P39956 HSP10YOR020C 321 nt2.52□□□□□ -2.01
RPH1P39956 YOR392WYOR392W 444 nt2.52□□□□□ -2.01
RPH1P39956 YBR285WYBR285W 435 nt2.52□□□□□ -2.01
RPH1P39956 SMC6YLR383W 3345 nt2.52□□□□□ -2.01
RPH1P39956 PES4YFR023W 1836 nt2.52□□□□□ -2.01
RPH1P39956 GPI17YDR434W 1605 nt2.51□□□□□ -2.01
RPH1P39956 BIT61YJL058C 1632 nt2.51□□□□□ -2.01
RPH1P39956 AI2Q0055 2565 nt2.51□□□□□ -2.01
RPH1P39956 YER066C-AYER066C-A 501 nt2.51□□□□□ -2.01
RPH1P39956 YKL066WYKL066W 444 nt2.51□□□□□ -2.01
RPH1P39956 YAL068W-AYAL068W-A 255 nt2.51□□□□□ -2.01
RPH1P39956 YNL058CYNL058C 951 nt2.51□□□□□ -2.01
RPH1P39956 YOR053WYOR053W 342 nt2.51□□□□□ -2.01
RPH1P39956 YBR032WYBR032W 303 nt2.51□□□□□ -2.01
RPH1P39956 YPR014CYPR014C 330 nt2.51□□□□□ -2.01
RPH1P39956 AVT2YEL064C 1443 nt2.51□□□□□ -2.01
RPH1P39956 YHR214C-CYHR214C-C 1437 nt2.51□□□□□ -2.01
RPH1P39956 YDR210W-BYDR210W-B 5313 nt2.5□□□□□ -2.01
RPH1P39956 YDR261W-BYDR261W-B 5313 nt2.5□□□□□ -2.01
RPH1P39956 YFL002W-AYFL002W-A 5313 nt2.5□□□□□ -2.01
RPH1P39956 YGR161W-BYGR161W-B 5313 nt2.5□□□□□ -2.01
RPH1P39956 YLR410W-BYLR410W-B 5313 nt2.5□□□□□ -2.01
RPH1P39956 YCL019WYCL019W 5313 nt2.5□□□□□ -2.01
RPH1P39956 ATP22YDR350C 2055 nt2.5□□□□□ -2.01
RPH1P39956 MRPL33YMR286W 261 nt2.5□□□□□ -2.01
RPH1P39956 YOR050CYOR050C 348 nt2.5□□□□□ -2.01
RPH1P39956 SGM1YJR134C 2124 nt2.5□□□□□ -2.01
RPH1P39956 MLH1YMR167W 2310 nt2.5□□□□□ -2.01
RPH1P39956 DAS1YJL149W 1992 nt2.49□□□□□ -2.01
RPH1P39956 RAD6YGL058W 519 nt2.49□□□□□ -2.01
RPH1P39956 YIL054WYIL054W 318 nt2.49□□□□□ -2.01
RPH1P39956 TEN1YLR010C 483 nt2.49□□□□□ -2.01
RPH1P39956 YOL134CYOL134C 390 nt2.49□□□□□ -2.01
RPH1P39956 YPL039WYPL039W 951 nt2.49□□□□□ -2.01
RPH1P39956 YPL080CYPL080C 327 nt2.49□□□□□ -2.01
RPH1P39956 ACM1YPL267W 630 nt2.49□□□□□ -2.01
RPH1P39956 TRZ1YKR079C 2517 nt2.49□□□□□ -2.01
RPH1P39956 ISW1YBR245C 3390 nt2.49□□□□□ -2.01
RPH1P39956 SNF12YNR023W 1701 nt2.48□□□□□ -2.01
RPH1P39956 RNH70YGR276C 1662 nt2.48□□□□□ -2.01
RPH1P39956 RPL29YFR032C-A 180 nt2.48□□□□□ -2.01
RPH1P39956 SWD3YBR175W 948 nt2.48□□□□□ -2.01
RPH1P39956 GPX2YBR244W 489 nt2.48□□□□□ -2.01
RPH1P39956 BFR1YOR198C 1413 nt2.48□□□□□ -2.01
RPH1P39956 TFB1YDR311W 1929 nt2.47□□□□□ -2.01
RPH1P39956 RRF1YHR038W 693 nt2.47□□□□□ -2.01
RPH1P39956 YIL030W-AYIL030W-A 339 nt2.47□□□□□ -2.01
RPH1P39956 YJR079WYJR079W 330 nt2.47□□□□□ -2.01
RPH1P39956 SSN2YDR443C 4263 nt2.47□□□□□ -2.01
RPH1P39956 MRD1YPR112C 2664 nt2.46□□□□□ -2.01
RPH1P39956 YDR186CYDR186C 2634 nt2.46□□□□□ -2.02
RPH1P39956 GCD10YNL062C 1437 nt2.46□□□□□ -2.02
RPH1P39956 BNR1YIL159W 4128 nt2.46□□□□□ -2.02
RPH1P39956 YER068C-AYER068C-A 432 nt2.46□□□□□ -2.02
RPH1P39956 YAL026C-AYAL026C-A 438 nt2.46□□□□□ -2.02
RPH1P39956 YLR287CYLR287C 1068 nt2.46□□□□□ -2.02
RPH1P39956 YNL043CYNL043C 321 nt2.46□□□□□ -2.02
RPH1P39956 KTI11YBL071W-A 249 nt2.46□□□□□ -2.02
RPH1P39956 YGL165CYGL165C 579 nt2.45□□□□□ -2.02
RPH1P39956 SWM2YNR004W 441 nt2.45□□□□□ -2.02
RPH1P39956 TSC3YBR058C-A 243 nt2.45□□□□□ -2.02
RPH1P39956 YPL197CYPL197C 414 nt2.45□□□□□ -2.02
RPH1P39956 snR191snR191 274 nt2.45□□□□□ -2.02
RPH1P39956 NUM1YDR150W 8247 nt2.45□□□□□ -2.02
RPH1P39956 TOP2YNL088W 4287 nt2.45□□□□□ -2.02
RPH1P39956 SIP3YNL257C 3690 nt2.44□□□□□ -2.02
RPH1P39956 SIR3YLR442C 2937 nt2.44□□□□□ -2.02
RPH1P39956 YDR194W-AYDR194W-A 153 nt2.44□□□□□ -2.02
RPH1P39956 GPI19YDR437W 423 nt2.44□□□□□ -2.02
RPH1P39956 YHL006W-AYHL006W-A 354 nt2.44□□□□□ -2.02
RPH1P39956 PAU14YIL176C 363 nt2.44□□□□□ -2.02
RPH1P39956 PAU1YJL223C 363 nt2.44□□□□□ -2.02
RPH1P39956 PEX17YNL214W 600 nt2.44□□□□□ -2.02
RPH1P39956 ATP3YBR039W 936 nt2.44□□□□□ -2.02
RPH1P39956 SUL1YBR294W 2580 nt2.44□□□□□ -2.02
RPH1P39956 IRC4YDR540C 540 nt2.43□□□□□ -2.02
RPH1P39956 BAT1YHR208W 1182 nt2.43□□□□□ -2.02
RPH1P39956 YJR023CYJR023C 402 nt2.43□□□□□ -2.02
RPH1P39956 HIT1YJR055W 495 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 19.6 ms