Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 OLE1YGL055W 1533 nt5.57□□□□□ -1.52
RIM101P33400 YAK1YJL141C 2424 nt5.57□□□□□ -1.52
RIM101P33400 BAS1YKR099W 2436 nt5.57□□□□□ -1.52
RIM101P33400 VHC1YBR235W 3363 nt5.56□□□□□ -1.52
RIM101P33400 YER053C-AYER053C-A 114 nt5.56□□□□□ -1.52
RIM101P33400 TGL4YKR089C 2733 nt5.56□□□□□ -1.52
RIM101P33400 STE20YHL007C 2820 nt5.55□□□□□ -1.52
RIM101P33400 MUS81YDR386W 1899 nt5.55□□□□□ -1.52
RIM101P33400 TFC8YPL007C 1767 nt5.55□□□□□ -1.52
RIM101P33400 TMN3YER113C 2121 nt5.54□□□□□ -1.52
RIM101P33400 YJR085CYJR085C 318 nt5.54□□□□□ -1.52
RIM101P33400 FPR1YNL135C 345 nt5.54□□□□□ -1.52
RIM101P33400 GIP4YAL031C 2283 nt5.53□□□□□ -1.52
RIM101P33400 PCA1YBR295W 3651 nt5.53□□□□□ -1.52
RIM101P33400 QCR7YDR529C 384 nt5.53□□□□□ -1.52
RIM101P33400 YHL006W-AYHL006W-A 354 nt5.53□□□□□ -1.52
RIM101P33400 NUP116YMR047C 3342 nt5.53□□□□□ -1.52
RIM101P33400 PDR10YOR328W 4695 nt5.52□□□□□ -1.53
RIM101P33400 YDL022C-AYDL022C-A 249 nt5.52□□□□□ -1.53
RIM101P33400 YGR269WYGR269W 327 nt5.52□□□□□ -1.53
RIM101P33400 RPS15YOL040C 429 nt5.52□□□□□ -1.53
RIM101P33400 MSC7YHR039C 1935 nt5.52□□□□□ -1.53
RIM101P33400 FOL1YNL256W 2475 nt5.52□□□□□ -1.53
RIM101P33400 AIM11YER093C-A 414 nt5.51□□□□□ -1.53
RIM101P33400 PUF3YLL013C 2640 nt5.51□□□□□ -1.53
RIM101P33400 HFA1YMR207C 6372 nt5.51□□□□□ -1.53
RIM101P33400 AXL2YIL140W 2472 nt5.5□□□□□ -1.53
RIM101P33400 CFT2YLR115W 2580 nt5.5□□□□□ -1.53
RIM101P33400 YFL034WYFL034W 3222 nt5.5□□□□□ -1.53
RIM101P33400 NPR1YNL183C 2373 nt5.49□□□□□ -1.53
RIM101P33400 CDC20YGL116W 1833 nt5.49□□□□□ -1.53
RIM101P33400 YDR182W-AYDR182W-A 204 nt5.49□□□□□ -1.53
RIM101P33400 SMT3YDR510W 306 nt5.49□□□□□ -1.53
RIM101P33400 snR45snR45 172 nt5.49□□□□□ -1.53
RIM101P33400 MDR1YGR100W 2853 nt5.48□□□□□ -1.53
RIM101P33400 HEH2YDR458C 1992 nt5.48□□□□□ -1.53
RIM101P33400 YOR073W-AYOR073W-A 234 nt5.48□□□□□ -1.53
RIM101P33400 HSC82YMR186W 2118 nt5.48□□□□□ -1.53
RIM101P33400 YPR003CYPR003C 2265 nt5.48□□□□□ -1.53
RIM101P33400 BUL1YMR275C 2931 nt5.47□□□□□ -1.53
RIM101P33400 SIP3YNL257C 3690 nt5.47□□□□□ -1.53
RIM101P33400 SEC39YLR440C 2130 nt5.47□□□□□ -1.53
RIM101P33400 AUA1YFL010W-A 285 nt5.47□□□□□ -1.53
RIM101P33400 NAG1YGR031C-A 492 nt5.47□□□□□ -1.53
RIM101P33400 YNR075C-AYNR075C-A 93 nt5.47□□□□□ -1.53
RIM101P33400 YOR218CYOR218C 420 nt5.47□□□□□ -1.53
RIM101P33400 YOR345CYOR345C 351 nt5.47□□□□□ -1.53
RIM101P33400 RPL21BYPL079W 483 nt5.47□□□□□ -1.53
RIM101P33400 snR17bsnR17b 332 nt5.47□□□□□ -1.53
RIM101P33400 YBR221W-AYBR221W-A 105 nt5.47□□□□□ -1.53
RIM101P33400 KRE6YPR159W 2163 nt5.47□□□□□ -1.53
RIM101P33400 YEL043WYEL043W 2871 nt5.46□□□□□ -1.53
RIM101P33400 SOD1YJR104C 465 nt5.46□□□□□ -1.54
RIM101P33400 YLR154W-AYLR154W-A 186 nt5.46□□□□□ -1.54
RIM101P33400 FAA1YOR317W 2103 nt5.46□□□□□ -1.54
RIM101P33400 SKT5YBL061C 2091 nt5.46□□□□□ -1.54
RIM101P33400 GDB1YPR184W 4611 nt5.46□□□□□ -1.54
RIM101P33400 MSH1YHR120W 2880 nt5.45□□□□□ -1.54
RIM101P33400 SIR3YLR442C 2937 nt5.45□□□□□ -1.54
RIM101P33400 RAD54YGL163C 2697 nt5.45□□□□□ -1.54
RIM101P33400 YGL024WYGL024W 336 nt5.45□□□□□ -1.54
RIM101P33400 GAT4YIR013C 366 nt5.45□□□□□ -1.54
RIM101P33400 GAL4YPL248C 2646 nt5.45□□□□□ -1.54
RIM101P33400 COY1YKL179C 2040 nt5.45□□□□□ -1.54
RIM101P33400 ALK2YBL009W 2031 nt5.45□□□□□ -1.54
RIM101P33400 PLC1YPL268W 2610 nt5.44□□□□□ -1.54
RIM101P33400 YDR089WYDR089W 2610 nt5.44□□□□□ -1.54
RIM101P33400 YGL069CYGL069C 465 nt5.44□□□□□ -1.54
RIM101P33400 RPL20BYOR312C 519 nt5.44□□□□□ -1.54
RIM101P33400 PXA1YPL147W 2613 nt5.44□□□□□ -1.54
RIM101P33400 NUP2YLR335W 2163 nt5.43□□□□□ -1.54
RIM101P33400 MCM10YIL150C 1716 nt5.43□□□□□ -1.54
RIM101P33400 CAF130YGR134W 3369 nt5.43□□□□□ -1.54
RIM101P33400 RPL28YGL103W 450 nt5.43□□□□□ -1.54
RIM101P33400 YIL174WYIL174W 228 nt5.43□□□□□ -1.54
RIM101P33400 YJL222W-AYJL222W-A 228 nt5.43□□□□□ -1.54
RIM101P33400 YMR324CYMR324C 243 nt5.43□□□□□ -1.54
RIM101P33400 YNL211CYNL211C 261 nt5.43□□□□□ -1.54
RIM101P33400 YPL260WYPL260W 1656 nt5.43□□□□□ -1.54
RIM101P33400 21S_rRNA21S_rRNA 3296 nt5.42□□□□□ -1.54
RIM101P33400 PRE4YFR050C 801 nt5.42□□□□□ -1.54
RIM101P33400 YGR022CYGR022C 330 nt5.42□□□□□ -1.54
RIM101P33400 MSD1YPL104W 1977 nt5.42□□□□□ -1.54
RIM101P33400 RIX1YHR197W 2292 nt5.41□□□□□ -1.54
RIM101P33400 DOT6YER088C 2013 nt5.41□□□□□ -1.54
RIM101P33400 PFK1YGR240C 2964 nt5.4□□□□□ -1.54
RIM101P33400 tS(GCU)Q1tS(GCU)Q1 86 nt5.4□□□□□ -1.54
RIM101P33400 RAM2YKL019W 951 nt5.4□□□□□ -1.54
RIM101P33400 YDL176WYDL176W 2127 nt5.39□□□□□ -1.55
RIM101P33400 RNR1YER070W 2667 nt5.39□□□□□ -1.55
RIM101P33400 VID22YLR373C 2706 nt5.39□□□□□ -1.55
RIM101P33400 RPS17BYDR447C 411 nt5.39□□□□□ -1.55
RIM101P33400 LSO2YGR169C-A 279 nt5.39□□□□□ -1.55
RIM101P33400 YLR154W-BYLR154W-B 165 nt5.39□□□□□ -1.55
RIM101P33400 YKL050CYKL050C 2769 nt5.38□□□□□ -1.55
RIM101P33400 KAR3YPR141C 2190 nt5.38□□□□□ -1.55
RIM101P33400 GDE1YPL110C 3672 nt5.38□□□□□ -1.55
RIM101P33400 snR62snR62 100 nt5.38□□□□□ -1.55
RIM101P33400 YOR333CYOR333C 417 nt5.38□□□□□ -1.55
RIM101P33400 MSH2YOL090W 2895 nt5.38□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 101.8 ms